| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_40498 |
|---|
| Symbol | |
|---|
| ID | 5005797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009369 |
|---|
| Strand | + |
|---|
| Start bp | 408872 |
|---|
| End bp | 409807 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | |
|---|
| GC content | 65% |
|---|
| IMG OID | 640421218 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421655 |
|---|
| Protein GI | 145354782 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.563879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.541352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGC GACGCGCGGA CGCGCGCGGG CGGCGCGCGC GGACGATTGT ATCCGTCGTT
CGCGATGGCT GTCGTCGCTT CATCGCGCGC GCGCTCCGCG CCGGCCCGAT CCCGCGGCAC
GTGGCGGTGA TCATGGATGG GAATCGTCGG TTCGCTTGCG CGAGCGGCGT GGCGCTGGCG
CGCGGGCACG CGCGCGGCGC GGACGTGCTC AGGGAGGCGT GCGCGTGGTG CTTCGAGCTC
GGCGTGGAGA CGCTGAGCGT CTACGCGCTG AGCACGGAGA ATTTCAAGCG CTCGGAGCGC
GAGCTCGAGG CGTTGTTCGA TTTGGCGTGC GGGGAAATCG GAACGCTGAT CGACGACGAA
GGGTTGCGAC TTAGAGAGGC GCGCGTGCAC GTGAGCGGGG ATTTGGACGC GCTGCCGAAG
CGCGTGCGAG ACAAGGCGAA GGAGGCGATG GAAAAGACGA AGGATAATCG AGGACCGATG
TTGAACGTGT GCATGGCGTA CACGGGGCGA GAGGATATCG CGCGCGCGGT GATGAAGACG
CGGGAAGACG TCCGGGGAGG AGCGTTGGAC GCGAGCGAGG TGGACGAACG CGCGGTGGCG
TCGCGATTGC ACGGCGCCGA GCGGGAAATC GAGCTCGGAG CAGGCATGCC GGAGGTTGAT
TTGCTCGTGC GCACGAGCGG GGAAACGCGG TTGAGCGATT TTATGCTCTT CAACGCGCGA
TTCGCGAAGT TGGTGTTCGT GGAGGTGTTG TGGCCGGATT TCACGTTTAT GGATTTTGTG
CACGCGGTTT GGCAGTATCA GCTCGGGGCG AAGGATTTGA AACGGTCGAG ACAGGCGTAC
GGCGACGCGA ATGCGATCGA GGCGGAATCT GCCGTCGTCG CCGAGGTTCG CGTTCAGCCG
GGGCGCGTGG CGAAAGGGGC GAAGCGTAGT GTGTAG
|
|---|
| Protein sequence | MPERRADARG RRARTIVSVV RDGCRRFIAR ALRAGPIPRH VAVIMDGNRR FACASGVALA
RGHARGADVL REACAWCFEL GVETLSVYAL STENFKRSER ELEALFDLAC GEIGTLIDDE
GLRLREARVH VSGDLDALPK RVRDKAKEAM EKTKDNRGPM LNVCMAYTGR EDIARAVMKT
REDVRGGALD ASEVDERAVA SRLHGAEREI ELGAGMPEVD LLVRTSGETR LSDFMLFNAR
FAKLVFVEVL WPDFTFMDFV HAVWQYQLGA KDLKRSRQAY GDANAIEAES AVVAEVRVQP
GRVAKGAKRS V
|
|---|
| |