| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_3943 |
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| Symbol | |
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| ID | 5005618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009369 |
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| Strand | + |
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| Start bp | 126032 |
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| End bp | 127552 |
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| Gene Length | 1521 bp |
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| Protein Length | 507 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | 640421039 |
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| Product | predicted protein |
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| Protein accession | XP_001421580 |
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| Protein GI | 145354625 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1499] NMD protein affecting ribosome stability and mRNA decay |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.673808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGCGTGCTGT GCTGCCTGTG CGCGATCCCG ATGCACCCGA ACCCGAGCGG CATGTGCGTC
GAGTGCGTGC GCACGCAGGT TGACATCACC GAGGGCATCA GCAAAAACTG CGTCGTCACG
TATTGCTCGC AGTGCGAGCG CTACCTGCAG CCGCCCAAGC ACTGGATCCG CGCCGATCTC
GAGAGCAAAG AGCTGCTGAC GTTTTGCATC AAGCGCATCA AGGGATTGCA AAAGGTGAAG
CTCGTGGACG CGGGCTTCGT GTGGACGGAG CCGCACAGTA AACGACTGAA GACGAAGCTG
ACCATACAGA AGGAAGTGCT GAACGGAGCG ATACTGCAGC AGACGTTCGT GACGGAATTT
GTGGTGGAGT GGAGGATGTG CGATGCGTGC GCGCGGAGCG CGGCGAATAG TGATCAGTGG
AACGCGTGCG TGCAGGTGCG GCAAAAAGTG GAACATAAGC GGACGTTTTT GTTCCTCGAG
CAGATGATTT TGAAGCACGG CATGGAGCGA GACGCGATCG GGATCAAGAG TCAGCCGGAT
GGGTTAGATT TTTATTACGG TCATCGATCG CATGGGTTGA GGTTTGTAGA TTTTTTGGGC
AGCGTGGTGG CGACGCGGTC GAGGGGCGAC AAGCAGTTGG TGTCGCACGA CGCGAATAGT
AATACGTACA ATTACAGGTT TACTTTCTTC GTGGAGATCG TGCCGGTGTG CAAGGAAGAT
TTGGTGGTGA TTCCTTTCAA GCTTTCGAAG GAGTTTGGGA GCGTTGGGCC GGTGATGCTG
TGCACGCGGG TGTCGAATTC TTTGCAGTTT ACGGATCCGG TGACGATGCG ACAGATTTGG
ATCGATCAGG AAAAGTATTG GCGCCAACCG TTTCGCGCGG CGGCGACGGC GAAGCAGATG
ATAGAGTACG TCATCCTTGA CGTTGAAGTC GATCAATCCA CGAGACAAGG GAAGTTGTGC
ATGGCGGATG TCGAAGTCGC GCGCTCAAGC GATTTCGGCG TCAACGACAC GACGTTTTTC
GTCAAGACGC ACTTGGGGAA TATCTTACAA GCGGGCGACA CCGCGCTTGG ATACGATTTG
ACAAATTTGC AAATCGTCGA TCCAGAGATG GAGAAGTACT CGGGTAAACA TCAAGGCGTT
GTGCCGGATG TTTTCCTCGT GAAGAAGTCG TATGCCGAGA GTCGTCGACG AAGGCGCGAG
CGAGGCGTGG CTAGAAATTG GCGTTTACAG CGCATGCAAG TGGAAGAAGA CGAAGAAACG
CAACAAAGGT CTCGCGGGAG CGCTGATCGC ATGGCTCAGG ACGAAGAGTT GTTCTATCAA
GAGTTGGAAG AAGACGAGGA AACGCGAGCG CAAGTACAAA TTTTCAAGGA TGAAAACGCC
ATAAACGCCA ACGTCACCGC GGCGGCTGGC GACGACGACG ACGACGACGA CGACGCACCA
GAGGTGCCGA TCGAGGAGCT TCTGGATGAG TTGACTCTAT TGCAGCGCCA AGCTGACGAC
GAGGACGACG AGAACGATCT C
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| Protein sequence | SVLCCLCAIP MHPNPSGMCV ECVRTQVDIT EGISKNCVVT YCSQCERYLQ PPKHWIRADL
ESKELLTFCI KRIKGLQKVK LVDAGFVWTE PHSKRLKTKL TIQKEVLNGA ILQQTFVTEF
VVEWRMCDAC ARSAANSDQW NACVQVRQKV EHKRTFLFLE QMILKHGMER DAIGIKSQPD
GLDFYYGHRS HGLRFVDFLG SVVATRSRGD KQLVSHDANS NTYNYRFTFF VEIVPVCKED
LVVIPFKLSK EFGSVGPVML CTRVSNSLQF TDPVTMRQIW IDQEKYWRQP FRAAATAKQM
IEYVILDVEV DQSTRQGKLC MADVEVARSS DFGVNDTTFF VKTHLGNILQ AGDTALGYDL
TNLQIVDPEM EKYSGKHQGV VPDVFLVKKS YAESRRRRRE RGVARNWRLQ RMQVEEDEET
QQRSRGSADR MAQDEELFYQ ELEEDEETRA QVQIFKDENA INANVTAAAG DDDDDDDDAP
EVPIEELLDE LTLLQRQADD EDDENDL
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