Gene OSTLU_27908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_27908 
Symbol 
ID5005763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009369 
Strand
Start bp406445 
End bp407527 
Gene Length1083 bp 
Protein Length360 aa 
Translation table 
GC content61% 
IMG OID640421184 
Productpredicted protein 
Protein accessionXP_001421654 
Protein GI145354780 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.789024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.584892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACG CCGACAACGC GTCCACGCGC GCGCGCGCCT TCGAACGCGG CGCGACGCTC 
CAGCCCGAAT ACGATTCGTT CTCTTGGCTC AAGACTGCGC TCCTCGCGAC GCCTCGCGCG
CGCGGCTTGC GCGCGTTCGC CTGGCCCTGG CTCTGTATCA ACGGCGTGAG CGTGTTGTGG
ACGTCGCTCT ACGAGCTCGC GCTGCCCAAG CGGACGTCGT CGCTCGGAAG CTTCGGCATG
GTGTACCAGC TCGTGTTCTC GACGATGGGA TTTCTGTTGG TTTTTCGGTT GAGCCGAGCG
GCGGTGCGGT TCTGGGATTG CCGCGCGGCG TTCGGGAACT TTAACGTCGG CGTGCGAAGG
CTCGTGGACG TGGCGCTGGT GCACGGGAAA GGACGAGACG CGCGGGCGCT GGATGATGTG
TGCGCGTGGG CGTGCGCGTT CGTCGTGGCG AGTAAACAGT TTTTGCGAGG CGTGAAGACG
ATTTCGGCGG AGGAGGTGAT GGGGATTCTG AGCGACGATG ACCGGAAGCG AGTGGAGAAC
GCGAGACATC CGCCGTTGTA TTGCGCGTCG ATGCTCAGAC GGGCGATTCA TCGCGCGTTC
GGGGTGGATG AGAAAGGCGG GACGACGAGC GATACGATTC GACTCGAGTC GCGCTTGCGG
CAGTTGCACG AGCAGTGTGA TTTTTTAATC ACCAACGAGG GCGCGTTAGA GCGATTGCGA
GGGACCAAGT TGCCGATGAT CTACGTGATG CATTTGAGAA CGTTTTTAAT GGCGTATTGC
GTCTCTATGC CGTTCGTGTT CGTAAACCAG TGGCGCTGGG GGACAATCGT CGCCGTCGCC
GTCGTGTCCT TCGCGCTGTT GGGCATCGAG GGCGCGGCGA CGGAGTGCGA GATTCCATTC
TCTGCCGACC ACGCGAATCA CTTGCGGATG GATCAGTACG CGCAAGCGTG TCTTTTGAGC
GTTGGTGCGT ACTTGGCGTG GAACGAGCGG CTCGAGGGAG CAAACGATTT CGGTCATCGC
GAGGGCAACG TCTCGTGCGC GTCGCTCGAA GATTTAGTCA TCGACGTCGA TACGAACGTC
TAG
 
Protein sequence
MLDADNASTR ARAFERGATL QPEYDSFSWL KTALLATPRA RGLRAFAWPW LCINGVSVLW 
TSLYELALPK RTSSLGSFGM VYQLVFSTMG FLLVFRLSRA AVRFWDCRAA FGNFNVGVRR
LVDVALVHGK GRDARALDDV CAWACAFVVA SKQFLRGVKT ISAEEVMGIL SDDDRKRVEN
ARHPPLYCAS MLRRAIHRAF GVDEKGGTTS DTIRLESRLR QLHEQCDFLI TNEGALERLR
GTKLPMIYVM HLRTFLMAYC VSMPFVFVNQ WRWGTIVAVA VVSFALLGIE GAATECEIPF
SADHANHLRM DQYAQACLLS VGAYLAWNER LEGANDFGHR EGNVSCASLE DLVIDVDTNV