Gene OSTLU_27894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_27894 
Symbol 
ID5005755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009369 
Strand
Start bp385500 
End bp387301 
Gene Length1802 bp 
Protein Length566 aa 
Translation table 
GC content60% 
IMG OID640421176 
Productpredicted protein 
Protein accessionXP_001421788 
Protein GI145355058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.404888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.456946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTCGCGACCG CGCGCGTCGC GCCTCGTCGC GACCGCGCGC GAGGCGAACG AACCGCGAAC 
GTCGAACGCG GCGATGGCCG ACCACGCGCG CGAGGACGAC GACAGCGCGC TCTTTACGTC
GTCGGAACGT CACGAAATCG CGAATGAAAA CGACGGAAAT CTCGCCGCGC GACCGCACCG
CGACGTCGCG TTCAAGCGCG CGTTCGCGAC GTCGCTCGCG GTGACGATCC TGTGCGGACT
TTTGGCGCTC TCGCGCGTCT CCGCGGACGC GCACGTGTTG ACGGAGGCGG AGACGCTGAA
CAAGTACGAG AGTTGTCACG CGGCGAACGG CGTCGGCGCG CGACGAAGGA CGCTGTTGGA
GGACGGCGCG GACGAAGACG CGGCGACGGC GTTGACGAAG GCGAGACCGT ACGTCGTGAT
GGCGATGCTC GGGGCGTGCG CGATGGGAGC GTTGGCTTTG ACGGCGTTTA AGCGACACCC
TCGATTCGCC ACGTGGTCGA TGATTTACGT GAAAATCGGA AGTTGCTTCG CGTTGTCGAT
CGCGTTCGCG ATTGAAAGGA TGGCGTTTCC GTGTATTCTG TTCGCGTTGT TCGCTGCGTT
TTTCGCGTAT TGGATGCACG CGACGCGCGA CCGGGTGGAG CTCGTCGCGA AGCTTCTCGG
CGCCGCGTCG ACGGCGTTGA AGGATAATCC TCATCTCATC ACCACGAGCG TCTTCGCCGG
TTTGGCCGTC ATCGTGTCCT CGATCATGTT TTTCACGTGC GTGTGGGGGG CGTACATGAA
CGGCTCGATC GCGCCGAGCG ATTACGAGCA CTACACTGGC GGGAAATGCT ACTACGGCGA
GGAAGTCGTT CCGTGTTGCG AATGGCAAAC CGACAGCTGG GTGGGCCCGT ACGTCGTTTT
CGCCTTGCTC GTGTGGCTCT GGTCACACAT GATCGCGGCG GAGATGCGCA CATTCGTCAT
CGGCGGGTCA ATCTCGCGCT GGTACTTTGC CCCGGCGGGA ACGACGGCGT TCGTGGGAAC
GACGCGCGAG TTCATCGGCC ACGCCTTCGG CGCATCGTTC GGCTCGTTGG CGTTCGGCGG
GTTAGTTTTG ACAGGTGTGA CCATTTTGCG CAACTTGAAT GAAAGATTGC GACGCGAATC
GCGCGGCTTC ATGGCTATTC TTGCGTGCAT CGTCACCGCC GTCATGGACT GTATCGCCGA
AATCATTGAA ACCATCACCA AGTTTGCGAC CATCCAGTGC GCCATCACGG GTGAATCGTT
GTTGGAATCC GGTCGCGAAG TCACGCGATT GCTGAAGGAT AACTTTTTGA GCGCCCTGCG
CGTGTGGTGG TTACCGGAGA TGATTTTGAA CATGACCGCG CTCTTCTTCG CCATCTTCTA
CGGCGTCGTC GTGGGGATTT CCGTGCACGT AGGTGTGCAA GTATCAACCG GTGACGATGA
TTTGGCTCAC AACGTCGGTG CAATTGTCGG CGCGTGCGCG GGCGTCTCTT CGATTGTGAT
TTTGTCATTT TTGTTCTCCG TCCTCTTGAC GTGCATCGAC GCCGTGTTCA TTTGCTACGC
CCGAGACAAG GACGAGAACA TGATCACCAA GCCCGAAATT GTCGCCATCT ACGACGAGGT
CACGGAAAAG ACGAGGGCGC CCGACGTCGC GGTGGCGGCG GCGCAGCGAG CGCAGCGTCC
GCCGCCGACC GCCCGGTCGG ATCCGGGCGT CGTGTTCCAA ACGCCGAACG CGCCGATGAT
GTACGGTCGC CCGGATGGAA ACTCACTGGT GTAACGCGTT CATCCAATAG TTTCAATAGT
TT
 
Protein sequence
MADHAREDDD SALFTSSERH EIANENDGNL AARPHRDVAF KRAFATSLAV TILCGLLALS 
RVSADAHVLT EAETLNKYES CHAANGVGAR RRTLLEDGAD EDAATALTKA RPYVVMAMLG
ACAMGALALT AFKRHPRFAT WSMIYVKIGS CFALSIAFAI ERMAFPCILF ALFAAFFAYW
MHATRDRVEL VAKLLGAAST ALKDNPHLIT TSVFAGLAVI VSSIMFFTCV WGAYMNGSIA
PSDYEHYTGG KCYYGEEVVP CCEWQTDSWV GPYVVFALLV WLWSHMIAAE MRTFVIGGSI
SRWYFAPAGT TAFVGTTREF IGHAFGASFG SLAFGGLVLT GVTILRNLNE RLRRESRGFM
AILACIVTAV MDCIAEIIET ITKFATIQCA ITGESLLESG REVTRLLKDN FLSALRVWWL
PEMILNMTAL FFAIFYGVVV GISVHVGVQV STGDDDLAHN VGAIVGACAG VSSIVILSFL
FSVLLTCIDA VFICYARDKD ENMITKPEIV AIYDEVTEKT RAPDVAVAAA QRAQRPPPTA
RSDPGVVFQT PNAPMMYGRP DGNSLV