Gene OSTLU_27748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_27748 
Symbol 
ID5005615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009369 
Strand
Start bp113879 
End bp114523 
Gene Length645 bp 
Protein Length214 aa 
Translation table 
GC content57% 
IMG OID640421036 
Productpredicted protein 
Protein accessionXP_001421712 
Protein GI145354899 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[R] General function prediction only
[T] Signal transduction mechanisms
[Z] Cytoskeleton 
COG ID[COG5126] Ca2+-binding protein (EF-Hand superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.112803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.571875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGCG TCGCCTCCGG TCCCGTGGAC GAGGAGCGCG AGCGCCAACG CCTCGCCGAC 
CAGACACACT TTCGACCGGG ACAAATTCGA GTCTTGCGCG ATGTCTTCTC CAAGGTGAGC
CGCTCGCACG ACGCCGACGG CGCGATCGAC GCGGATGAGT TCCAACTCGC GCTCTTCGGC
CGCGAAGTGA ACGGAGGGAA GACGAGAGAT TTGTTTAGCG AACGAATCTT CGCGTGCTTT
GACAGCGCGC GGGACGGACA GTTGACGTTT GAGGAATTTG TGAAAGGCTT GAGCGTGTTT
CATCCGCAAG CGACGCGAAA CGAGAAGACG GAGTTTGCAT TTAGGGTGTA TGACTTGCGC
GGGACGGGCG CGATCGAAAG GGAGGACGTG CGAGAGATGT TGGAGGCGGT GCTGCGACAG
TCGAAGGCGA TGACGCTGAC GAAGGAGATG ATGGAGGCGG TGCTGAACAA AACGTTCGAG
GATTGCGATT TGACGAAGGA TGGGGTGATT TCCATGAAGG AGTTTAAGAC GTTGGTGGAG
AAGAATGAGA AGATCATCGC GAACATGACG ATGCCGAGCT TGGAGCGACT GACTAAGGTG
TATCCGGACT TTTTGTTCAC GCAACGGGTT GGTTCGGTGC GATAG
 
Protein sequence
MGCVASGPVD EERERQRLAD QTHFRPGQIR VLRDVFSKVS RSHDADGAID ADEFQLALFG 
REVNGGKTRD LFSERIFACF DSARDGQLTF EEFVKGLSVF HPQATRNEKT EFAFRVYDLR
GTGAIEREDV REMLEAVLRQ SKAMTLTKEM MEAVLNKTFE DCDLTKDGVI SMKEFKTLVE
KNEKIIANMT MPSLERLTKV YPDFLFTQRV GSVR