Gene OSTLU_27712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_27712 
Symbol 
ID5005664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009369 
Strand
Start bp50125 
End bp51237 
Gene Length1113 bp 
Protein Length370 aa 
Translation table 
GC content67% 
IMG OID640421085 
Productpredicted protein 
Protein accessionXP_001421690 
Protein GI145354855 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0484307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC CCCCGACGCG CGACGCGCCG ACGCGCCGCG CGCCCGCGCG CGCGCTCTAC 
GCGTGTTACC TCGTCGTGAG CCTCGATCCG AGCAAGAAGG GAAAGTCGTA CGTCGGATTC
ACGACGAACC CGCCGCGACG ACTCGCGCAG CACAACGGCG CGATCGCGAA CGGGGCCAAG
TACACGATGC GACTGCGACC GTGCGACATG GTGCTCGTCG TCTCGGGATT CAGCGACAAG
GTGCAGGCGC TGCAGTTTGA GTGGGCGTGG CAGCGACCGG CGAGCTGTCG AGCGACGCGA
ACGTTGGCGA GGGAGCGCGG AGTGAGCGAT AAAACGAGCG CGCCGGGGAA GAAGGCGATG
GTGATGTGTG GGATGTTGAA CACGGCGCCG TGGAAACACA TGCCGCTGAC GGTGCACTGC
ATGAGCGAGG TCGGGGAGAG GCTGATTGAA AAGTACGCGG ACGCGATTCC GGCGCACGTG
GAGCGGAGAC GAACGACGAC GCGGGAGATG GATGCGATCG TCGCGGCGAG CGCGAACGCG
GAGGAGGAGG AGATGGATGA GGAGATGGAT GATGCGATGC GAGCGCGGGT GATGGACGTC
GGTGTGAGTG GGACGCCGAG CGCGTCGGCG TCGGCGTCTC GGCCGGGCGG GGAAGCGCTG
AAGTGCGGCG TGGACGCGTG CGGGAAGGCG ATTCGAAGCG ATCGCGCCGT CGGGTGCGCG
ACGTGCGGCG CGCGTTTTCA TCCGGTGTGC TTGGCGCGTC ATTTTTTCGA TCGCGCCGGG
GACGAGGCGT TGTCGTGGTC GAGTCGATTG ATCCCGGACC ACGGGCCGTG CGCGCGGTGC
GGAAAACGTC TCACCTGGGG CGCGGCGATC GGCGCCGGCG CGGCGAGAGA ACCCGCGACG
GAAACGACGA CGCCTCGAGT CCACGCCTCG CGTGATTGCG AGCGAGACGG CGAAGTCGTG
ACGTCGACTG AAAAGATCCG ACGCTTGCGG TCGGCGGAGA GAAGAGAAGT CGAACGCGCG
AGAGTGCAAT CGTGGGCCAG GGACGTGAGC GACGTGAGCG ATGATAGCGA CGACGATATG
CACGACAGCG ACAGCGACGT GATCGTAGAG TAG
 
Protein sequence
MRAPPTRDAP TRRAPARALY ACYLVVSLDP SKKGKSYVGF TTNPPRRLAQ HNGAIANGAK 
YTMRLRPCDM VLVVSGFSDK VQALQFEWAW QRPASCRATR TLARERGVSD KTSAPGKKAM
VMCGMLNTAP WKHMPLTVHC MSEVGERLIE KYADAIPAHV ERRRTTTREM DAIVAASANA
EEEEMDEEMD DAMRARVMDV GVSGTPSASA SASRPGGEAL KCGVDACGKA IRSDRAVGCA
TCGARFHPVC LARHFFDRAG DEALSWSSRL IPDHGPCARC GKRLTWGAAI GAGAAREPAT
ETTTPRVHAS RDCERDGEVV TSTEKIRRLR SAERREVERA RVQSWARDVS DVSDDSDDDM
HDSDSDVIVE