Gene OSTLU_27700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_27700 
Symbol 
ID5005656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009369 
Strand
Start bp27049 
End bp29976 
Gene Length2928 bp 
Protein Length975 aa 
Translation table 
GC content62% 
IMG OID640421077 
Productpredicted protein 
Protein accessionXP_001421552 
Protein GI145354565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.584028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC CGTCGGCGCC GAACGACGAG CTCCTGTCGA CGATACTGTT TTTGATCAAC 
AATCACTACT GGTGCGCGCT GTACGAGCTC TACGTCGACG CGCGAAGGCT GAATGTGTTG
GATGCGGATT TGCCTTCGCT GAACACTTTA AAGTCGTTCT TTAACGACTC AAAGCGGTTC
CCCGACGGCG TGTTTCGCGC GGTCAACGAC GCGTTCGACA GTGGGGTGTC GGCCGCGCGC
GTGGTGGACG CGGAGTCGCG CGCGGCGGTG GCGGAGTACG AGTTGAGGTG CGCGCGGGAA
GATTTGCAAA ACTCGCGGCG AGGCGCCGGC GGAGGCGGAG GCGAGGACGG TGGCGAAGAC
GCGAGCGGGG CGAGCGTGCG GCGAGGCGTG GACGCGGATG ATGCGTTTGC GCCCACGAGC
GGTGATTCCG CGCGCTCGAG CGCGGATGAC GTGGGTTTGG ATGCGAAACT AGACGCGGCG
ACGTACGAGT ACCTGTCTCG TCGCGGATAC AAAGCCACGG CGCTTTCGAT GCGCGACGAA
TCGTCCACAG CGGCGAAGTT GATGGAAAAA GATTTCGCGA GCGATGGAGA AAGAAGTTTC
GGGGCGCTGC GAAGGATGTA CGAGCGCGCG AGAATGACCG AGACGACGGC GAGCGCCCTG
GAGAGCGAAC GCGCGCGCGT CGACGACGTG GAGAGCGAGC TGATTCGCGC CCGCGCGCGA
ATCGATGAAC TCGAACGCGA AAATACGACG ACGACGACGT TGCGCGACGC GTTATCGTCG
AAATTAGCGC TAGCAGAAAG TGAGCTGAGC GATTTGAAGG TTTCGGCGGC GCAGTGGGAG
AAGAAGGCGA CGGAATCCGC GAGCGAGGTG AATAGGCTGT TGTCTGAACT CGGCGCTGGG
AACGAGGAAT GGTCGAGTCG CGACGGCAAC GGAGTGCCGC GAACGACGAT TGAAGAGAAC
GATACAATCG ACGCGGTCTT GTCGTTCATT TGCGCGATCG CGCCGAAGGT TTCGCCGGCG
GCGCGGAAGG AGTTGCTGCC GATGATTTCC CGCGCGTGCG TGCGAGCCGC CGGCGATGAA
AAACGCGCCG CACGGTCTTC GAATCTGTTT TTTGAGCTCT TCAAAGCCCC GAATGCAGAA
CAGAGAGATG CAATCGTCGA CGCGATCGCG AACGTTGGCG AAATCGTGGG CATGAACGCC
TTCGAGGGGA CATTCATTCG AGGCTGCCTC GGATCCGAAG CCGTGGCGAC GATGAACGAA
GAGCGACGAG TGCTCGTGCT CGACGCCATC GCCAAGCTCG GCGCATCATC GTGGTTTACT
TTGAATAATT TTGTCATGGA TGGTTTCAAG CGTGCCGCGG TAGATCCAAG CGATGGTGTT
CGAGCGGAGT GCTCACGAGC GGTGGAGCGT TACATCGCCG CAAACGCGCC GAGCGACGAC
AACATGGAAA CGATTGAAGA CGTTTTGATG ACGCTCGCGT GCGACGGCTC CGACGAAGTT
GCCGACGCCG CGCGAGCGAC GCTCGCCCCC GCCGTCGCAT CTTGGTACCT AGGTGCGAAT
CCACGACGGT TCACGGACGT TTTCGCGCGA AAGGTGCTCG ACAAAGCCGC CGAGGCATTG
CGGAGCGGAT GGACCGGCGA AGGCGCCGAG CGGGAGTTCA AGGGTTGGGT GTCTCCAGAA
GATGGTGATC GTCATCGATG GCACGCGACG AGCCTAGTAA AGACGTTTGA AGCGTTTGCG
CGGCCGATTC GCGAGGCGTT AAGCGCGACG AAACCCGCGT CTATCGCAGA CGGCGTCGAC
GACGCGCTGA GCAAAGACGC TCCAGATTCC TGGCCTTTCG CGCAGTGGTG CGTAAAAGAA
GCCTCAGACT TGATTGTCCA AGTCATTAGC TCCACCGCAC CCGATGTCGT CGGTCAAGAG
TCCGTGAGAG AGAGCATATG CGCCGCCGTC GCGTCTTGGT GCGGCGTTCT CGGCGCGCTC
GCCACGCGAG CGGTTTTGAT TGGAAAAGTG AACGATGCTT GCTTGGTGAG TTACGATCAG
CGTCGCGCGG TGATGCCAAT ATTGCTCGCG GGCGTGGTTC CTTACACCCC GGACGGTGGC
GCCGTGCTCG GAGATTACAT TAAGCGCCTG ATTCAACAAG CCAGCGCGGA GTCGTGCGAT
GAAATCATCG ACGCCGCGCG GTACCTCGCC GCGTTCGAGC AGCACACCGC AAACTTGCTC
GATGCGTTGA AGCGGTGCGC GCATCCGATC GCTGAGAACC CACCGACCGT GCGCCTTATC
ACCGCACGTC TTCTCGCGGC GACGTCGGAG ATTTTGCCGC TCAAGCACGT GCTCGAACAC
GTCTATCCCG CGCTCAACGT TTTGCGAGCC GATCCCGAGA CGAGTGTCCG CCGCGAAACC
GCTCTAGCGC TCGCGGTGTG CGCGTGCACG CACTACGAGA CTATCGAACC GACGACGCAA
ACGATGCGTC AGCTCGAGTC GTTGATCGGC GACTCCGACG TCGGCGTCCG CGTCGCCGTC
GTCGAGGCGA TGTCCCTCGG CGCGTCGGTG CCCGGAACGT CGTTCGCCGT CTCCGCCGCC
AGCGCGCTCT CAGCCATCGC GCAGCTGCCG AGTGAAGAAC ACGAGATCGC GCACGCGCTT
TTCGCGGCCA TTCGCGACAT GCTCGGCGCG GATGGCGATT TGTTCCCTCA AATCTCCCCC
GCCCTCGTCG CCTTGCTCGC GAGCGGAGGC CTCGACCAGG GGCGTCGCGC CCAAGTCGAA
ACCATGCTTC GCGACGGCGG CTGGTCCCCC GACACCGCGC CATCGAGCAT CACCAACGTC
ACCGTCGACG CGCCCCACGC ACCGGGACGC GGGAGGTCCT CCGCGTTCGA TCGTATGAAG
AGCGTGGGCC GTTCCGCCTT CGGCGGCCGC GGTCGCGACG CTCGATGA
 
Protein sequence
MAPPSAPNDE LLSTILFLIN NHYWCALYEL YVDARRLNVL DADLPSLNTL KSFFNDSKRF 
PDGVFRAVND AFDSGVSAAR VVDAESRAAV AEYELRCARE DLQNSRRGAG GGGGEDGGED
ASGASVRRGV DADDAFAPTS GDSARSSADD VGLDAKLDAA TYEYLSRRGY KATALSMRDE
SSTAAKLMEK DFASDGERSF GALRRMYERA RMTETTASAL ESERARVDDV ESELIRARAR
IDELERENTT TTTLRDALSS KLALAESELS DLKVSAAQWE KKATESASEV NRLLSELGAG
NEEWSSRDGN GVPRTTIEEN DTIDAVLSFI CAIAPKVSPA ARKELLPMIS RACVRAAGDE
KRAARSSNLF FELFKAPNAE QRDAIVDAIA NVGEIVGMNA FEGTFIRGCL GSEAVATMNE
ERRVLVLDAI AKLGASSWFT LNNFVMDGFK RAAVDPSDGV RAECSRAVER YIAANAPSDD
NMETIEDVLM TLACDGSDEV ADAARATLAP AVASWYLGAN PRRFTDVFAR KVLDKAAEAL
RSGWTGEGAE REFKGWVSPE DGDRHRWHAT SLVKTFEAFA RPIREALSAT KPASIADGVD
DALSKDAPDS WPFAQWCVKE ASDLIVQVIS STAPDVVGQE SVRESICAAV ASWCGVLGAL
ATRAVLIGKV NDACLVSYDQ RRAVMPILLA GVVPYTPDGG AVLGDYIKRL IQQASAESCD
EIIDAARYLA AFEQHTANLL DALKRCAHPI AENPPTVRLI TARLLAATSE ILPLKHVLEH
VYPALNVLRA DPETSVRRET ALALAVCACT HYETIEPTTQ TMRQLESLIG DSDVGVRVAV
VEAMSLGASV PGTSFAVSAA SALSAIAQLP SEEHEIAHAL FAAIRDMLGA DGDLFPQISP
ALVALLASGG LDQGRRAQVE TMLRDGGWSP DTAPSSITNV TVDAPHAPGR GRSSAFDRMK
SVGRSAFGGR GRDAR