| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_25591 |
|---|
| Symbol | |
|---|
| ID | 5005616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009369 |
|---|
| Strand | - |
|---|
| Start bp | 117403 |
|---|
| End bp | 119199 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640421037 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421714 |
|---|
| Protein GI | 145354904 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.749035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.825443 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCG ATGATGACGA CGGCGACGGC GACGCGCACT ACGCCGGCCT GTTCCTGGAC
GCCGACGCGC GCCGAAAGGT GTGGGCGCTC GCGCACCGAC TGCTGGGGAT GTCGTGCGCG
CCGCCGGGCG CGAAATCGTC GGCGGATCAC GTGACGCTCG CGCACGCGCC GGATCGAGAC
GCGACGACGC GAGTGCTCGA GCTCGCGCGG CGACGGCGAT CGCGCGCGGT GACGGTGACG
ATGACGCACG CGTGCGTGCG ACCGCGCGCG ATGGTGATGG CGGTGTCGAT CGAGATGGAT
CGCGAGCTGA CGGGGCTGGA GACGCCGGCG ACGCCGCACG TGTCGGTGTT CGCGCCGGAG
ACGATGGAGT GGAGAACTCT GGGCGACGTC GTCGCGGAGG ATTTGGCGCG AGACGAGGGG
TTGGATTTGC GGGCGTTGGG CGCGAGCGAT GAGGCGCTGC GGTTGGAGTG TCGGCTAGGA
GTGAAGATGA GAGACGGCAG CGTCGATTTT GGATTCGGGG GCGAGACGAG CGATTCGGGG
CGGCACTCGG GATCTTCGTC GGCGATTCCG GGATTGGCGA GTCCGACTAA GAACAAACAC
TCGTTGGGGC GAACGAGCGA GGCGGCACCG CGCGCGACGT CGACGCGACC GGAGTATATG
ACGAAGAAAC AAATCGCGGC GGCGAAGGCG AAGGCAAAGG CGCGCGAGGA GGCGCGGCCG
TTGACGGCGG AGGAAATGGC GGAACGCGCC GTCGCCGAGG CGAAAAAGCA GGCACTGAAG
GAGGAAAAAC GACGAAATAA CATACGACGC GAGTACTTGA GCTTGTGCGA GATGTTCGAG
GAGCATCATC CAGAGTTTGT GAAGACGACG TTCATTCGAT TTGGCTACGA CATGGAGGCG
ACGGCGCAAG ATTTGTTGGC CAGCATCGCG CCGGACATCG AGGACATGTA CGACAACGAT
GAATACTATT CGGAGTACGA TACGGAAGAC GACGAATATG GATCCGAATC CGAATATGAC
TCCGAACCCG AATCCGAAGA CAATTCTTCC AAGAAGGAAG GAATCAGCAA AGGGCTGAGC
AAGAAGATCC GCCGCGCACA AGCGAAAGCG CAACGTCGGA AAGCTCGTGA TGAGGAAACT
ACGCGCCGTC TCCAAGCCGC CGGATTAGGT ACCGACCGAC GAGAGGTGAC AATCACGAGC
GGGACGACTT GGGTCTCTAA GCCGCCGCCC AGCTCGACGC CGAATTGGGA AGTCAGCGGG
GCGCGCGCGG AAATCATAAA CGCTGCAAAA CACTTGGCGT TCCTACAAGG TCCAAAGGCG
AAGACGCAGA GGTTAAGCGT AAATTTGTCG GATAGAAACG CCGCGCGTCT AGAAGAGCTC
TCTGAAGAAA TGTCGCGCTT GCGAGTGCAG AGAGATAGGG GCGATACACG CGCCGCGGCG
TTGCTCGGCG AAAAGGCGAA ATTGAAGCAG GCGCTCGAGT CGATTGATAC CGAGGTTGTA
GCACCTTCGA CAGCGGACAA CGATAATCGA GGCTTCAATC GCGTCATTGA TTTCCACGGT
TACGATAGGT TGGACGCGAT TCGACGTCTC GAGCGCGAAC TGCTGAAGAT AGCGCCAATG
GTGAGTTCGG ACTGGTCAAT CAAACTCATC ACCGGGCGAG GGAATCACAG CCGCGGCGGA
CGCGTTATTC ACGGCGACAT CATGCGCTGG TTGACTCAGA ACGGTATCGC CTTTGACGAA
GGACTCGGGC ACGTCGTCGT GCGCACGATG GCGTCCATCA ATCAGTAAAC CAGTTCC
|
|---|
| Protein sequence | MARDDDDGDG DAHYAGLFLD ADARRKVWAL AHRLLGMSCA PPGAKSSADH VTLAHAPDRD
ATTRVLELAR RRRSRAVTVT MTHACVRPRA MVMAVSIEMD RELTGLETPA TPHVSVFAPE
TMEWRTLGDV VAEDLARDEG LDLRALGASD EALRLECRLG VKMRDGSVDF GFGGETSDSG
RHSGSSSAIP GLASPTKNKH SLGRTSEAAP RATSTRPEYM TKKQIAAAKA KAKAREEARP
LTAEEMAERA VAEAKKQALK EEKRRNNIRR EYLSLCEMFE EHHPEFVKTT FIRFGYDMEA
TAQDLLASIA PDIEDMYDND EYYSEYDTED DEYGSESEYD SEPESEDNSS KKEGISKGLS
KKIRRAQAKA QRRKARDEET TRRLQAAGLG TDRREVTITS GTTWVSKPPP SSTPNWEVSG
ARAEIINAAK HLAFLQGPKA KTQRLSVNLS DRNAARLEEL SEEMSRLRVQ RDRGDTRAAA
LLGEKAKLKQ ALESIDTEVV APSTADNDNR GFNRVIDFHG YDRLDAIRRL ERELLKIAPM
GITAAADALF TATSCAG
|
|---|
| |