Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_1559 |
Symbol | |
ID | 5005774 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009369 |
Strand | + |
Start bp | 436982 |
End bp | 438508 |
Gene Length | 1527 bp |
Protein Length | 486 aa |
Translation table | |
GC content | 56% |
IMG OID | 640421195 |
Product | predicted protein |
Protein accession | XP_001421664 |
Protein GI | 145354801 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACCCGG TGAATCTCGG ACGGAAGTCG CGGGCGGCGT TTGAGAACGT CTTCAAGCAG CTGACGTCGT TGACGTCGTT TCAAAAGTCC ACGGCGCCGA CGAACGCGAG AGAGTTTGAT CAGGTCTACG ACGCGGATTT GCTCAGTGGG AGCTCGGTGG GGGAGTTCGA GACGCCGAAC GCGAAGTTTA CGACGGTGTT GGTCACGGGG GCGACGGGGC GCATAGGTCG CGTTTTGATT CGCAAGCTCT TGTTGCGCGG ATACACAGTC AAGGCGCTCG TGCGTCGCCA GGAAGACGTC GAGAAGCTTC CGGGTTTGGT ACAAGTCATC GTCGGGGACG TCGGGGAGAA AGAAGTGATC AAAAATGCCA TGATTGGCGT GAACAAGGTG ATTTACTGCG CGAGCGCAAA AACCTCCGTC ACGAGCGACT TGTACAACGT CGCCGACCAA GGTGTGAAGA ACGTGGTATC GTGCATGCAA GACTACTATC ACATGCTCGC TTCCCGTCGC GCCGGTCGCA GCGCCAAGTC CAAGGTGATG TTGACCAACT TCAAGCACCC GACGGCGTAC GAGGCGTGGG ACGTCGAAGA GATCGAAGCC GACGCCGGCG CCGGCGCCGA CGGGCGATGG GCCGCCGCGG CGGAGATGCA GCGTGTGAAC TTCGATCCGC TCTACCCCGA AGACGAGGAC AAACCTTTCG AATTCGCGAC GTTCAACGGT TTCATCACCT CTCGTACGGG TAAGGCTGAA GTGAGCTCAA ACGTCGAAGG TTTGCAAGCC GACGTCGACT TTTCAGCCAA GGAAGGTTTG TTGTTCCGTT TGAAGGGCGA CGGGAAGCGC TACAGCGTGA TGCTCACGCA GGACGATGGT TCCAAGTTCA GATTTTCGTT CAACACCACT GGGGGATGGC AAGTCATTCG TATGCCGTTT CACAAATTCG TCAGTGAAGG GAAAACTTCT TGGGGAGACG ACGGCGACGC CATTCTCGAC TTGACGAGAA TCGAGAAGAT TGGCGTTCGC TTCGATGCGA GAAAGAACCA ACGCGAGACG ACGATGTCAG ACGTGATGAG TGGGAACAAT AACATGTTCA ACTTGACGCT CGAGTACGTC AAGGCGATTC CCAAGGGCGA GGAACCCGAT GTCATTTTGG TTTCGTGCTT CGGCGCCGGT TTGGAAGAGG GCGAAGAAAA GGAACGTATC CTGAAGATAA AGCGTGACGG TGAACGCGTG CTGCGCAACT CTGGTGTAGG ATACACCATC GTTCGCCCGG GTGAGCTCGT CGAAGAGGCT GGTGGGGGCA AGGCGTTGGT TTTCGATCAA ACCGAACGCA TCAACACGCC GATTTCTTGC GCCGACGTCT CCGACGTCTG CGTCAAGGCG ATGCACGACG AAGAGGCGCG TAACAAGAGC TTCGATGTCG GCTACGAGTA CGAAAGCGAG CAAGCCGAGT ACGAGCTGAT CACCCAAGTC AAAGGCAAAT CCGACAACTA CCTCACTCCG GCGTTGAAGG TGCTCGAAAA GAACTCG
|
Protein sequence | VNPVNLGRKS RAAFENVFKQ LTSLTSFQKS TAPTNAREFD QVYDADLLSG SSVGEFETPN AKFTTVLVTG ATGRIGRVLI RKLLLRGYTV KALVRRQEDV EKLPGLVQVI VGDVGEKEVI KNAMIGVNKV IYCASAKTSV TSDLYNVADQ GVKNVVSCMQ DYYHMLASRR AGRSAKSKVM LTNFKHPTAY EAWDRVNFDP LYPEDEDKPF EFATFNGFIT SRTGKAEVSS NVEGLQADVD FSAKEGLLFR LKGDGKRYSV MLTQDDGSKF RFSFNTTGGW QVIRMPFHKF VSEGKTSWGD DGDAILDLTR IEKIGVRFDA RKNQRETTMS DVMSGNNNMF NLTLEYVKAI PKGEEPDVIL VSCFGAGLEE GEEKERILKI KRDGERVLRN SGVGYTIVRP GELVEEAGGG KALVFDQTER INTPISCADV SDVCVKAMHD EEARNKSFDV GYEYESEQAE YELITQVKGK SDNYLTPALK VLEKNS
|
| |