Gene OSTLU_89214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_89214 
Symbol 
ID5005443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009368 
Strand
Start bp679080 
End bp680417 
Gene Length1338 bp 
Protein Length445 aa 
Translation table 
GC content56% 
IMG OID640420864 
Productpredicted protein 
Protein accessionXP_001421530 
Protein GI145354518 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC TCACGCCCGA GCTCGCGAGC GCGCGAACCA TCGGCGACGC GTGCGCGCTC 
AAAGCTTGCT CCCTGAACGC CGTCGAAGAC GACGTCCTGG CGCGCGCGGA AACGACTTCC
GGGGCGATTA AAAAGCTCGA CGTGAGCGAA AATGCGTTGA GCGACTTGTC GGGCGTGCGA
TCGACGTCGC TGACGTGGTT CTCGTGCGCG AATAACGTGT TAAAGTCGGA CGCCTTGGCG
GCGCTGGGAC AAAACTGTCC TCGGATTCGC ACGCTGAATG TGAGCGGAAA CGACGGCTTG
CGCACGCTGC GCGGGGTAGA AAACATGCAC GCACTGGCGG CTCTTATCGC GAAAGAGTGC
GGTCTGCGAG ATATCGATCA CGTGCGTGGG TTGAAGGAAT TGAACACGTT GGCGTGCGCC
GAGTGCGAGC TGCGGGACGT CGGCGACGCG TTGAGCGAAA GTCCGGCGCT TCGCAAGGTG
AATCTGTCGA AAAACGCCCT GTCCAAGCTC GGAATAGATG CGTTGCAGTC ATCCAGGGGG
TTAAGAGAGT TGCGCGTGGC GCACAACGAG TTGAAGACGA TTCCGCCGTG CGTGGCGAAG
ACGCCGAATT TGCGGATATT AGACGTCGGG TACAATAAGA TTTCGGATTG GGGCGATTTG
AGCGCGCTGC GCGAGCTCAA TCGTCTGGAA CAGTTGACAC TGCGTGGGTG CCCGATCGCA
AACGATCCAG AGTACGCGGA GAAGATCACG CGCATGTGCC CCGGGTTGAA ATTACTAGAC
GGCAGGAAGC CTCGAGACGC GCGAGGGCGA CCGCCGGAAC GAGCGGACGC GACGAGCGAC
GATGAGCTCG ACGATATCGA TCCGGAAGAA AAATCGAAGA AGAGGAAGAA AGTAAAGGAT
AGCGTGAAGG GACGAGACGG TGAAAAGGAT GACGACGGCG GCGGCGGTGA AAGCGAACGT
AGCTTTGTGG AACTCTTCGT GGCAAAGAAC AAAGGAAAAG TATTAGATGG CGACGGCGCA
GTGGCGACGC ACGAAGAGGA GAAGGATCCA ACAAAGCGCA CGGGATTGAT AGGCGTGTTC
GAGAACAAGG ATTTGAAACG CAAAGGGCCA TGCGGTAGCG CGGCGTTCAA AGCTTTATTG
AAAAATGATG CGGGGACGGG CTTGAACGCG GGGACGTGGG ACGAAGACGA CGTGACGATG
CAAAAGACGA AGAAGAAGAA GAAAGAAGGA ACAACGGATT CGACCGAAAA GAAGAAAAAG
AAAAAGAAGG ATTTGCGCGA AATGACTCCC GAGGAACGTA AAGAACACTT GCGGATGCAG
CGCAAACGTG GTTATTAA
 
Protein sequence
MKTLTPELAS ARTIGDACAL KACSLNAVED DVLARAETTS GAIKKLDVSE NALSDLSGVR 
STSLTWFSCA NNVLKSDALA ALGQNCPRIR TLNVSGNDGL RTLRGVENMH ALAALIAKEC
GLRDIDHVRG LKELNTLACA ECELRDVGDA LSESPALRKV NLSKNALSKL GIDALQSSRG
LRELRVAHNE LKTIPPCVAK TPNLRILDVG YNKISDWGDL SALRELNRLE QLTLRGCPIA
NDPEYAEKIT RMCPGLKLLD GRKPRDARGR PPERADATSD DELDDIDPEE KSKKRKKVKD
SVKGRDGEKD DDGGGGESER SFVELFVAKN KGKVLDGDGA VATHEEEKDP TKRTGLIGVF
ENKDLKRKGP CGSAAFKALL KNDAGTGLNA GTWDEDDVTM QKTKKKKKEG TTDSTEKKKK
KKKDLREMTP EERKEHLRMQ RKRGY