Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_5025 |
Symbol | |
ID | 5005390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009368 |
Strand | + |
Start bp | 97472 |
End bp | 98284 |
Gene Length | 813 bp |
Protein Length | 271 aa |
Translation table | |
GC content | 62% |
IMG OID | 640420811 |
Product | predicted protein |
Protein accession | XP_001421205 |
Protein GI | 145353834 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5206] Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.450256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0912293 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | AACTGGGCGC TGATCGTGGA CGCGTCGAGG TATTGGTTCA ATTATCGACA CGGCGCGAAC GCGCTGTCGA TGTACAGGAG CGTGAAACGG ATGGGGATTC CGGATTCGCG CGTGGTGCTC ATGCTCGCGG ACGACCACGC GTGCGACGCG AGGAATCCCG CGCACGGACG CGTGTACGGC GACGAGGACA GGGGCGTGGA GCTGTACGGA GACGACGTGG AGGTGGATTA CAGAGGGACG GAGGTGACGC CGGAGCGCGT GATTCGAGTG CTGACGAATC GACACGAACG CGGGACGCCG CGGTCGAAAA AGTTGCTCCC GGGGGCGCGG AGCAACGTGT TGATATACAT CACGGGACAC GGCGGCGATG GGTTCATTAA GTTTCAGGAT CAGACGGAGT TGCGGGCGGA GGAGATCGCG GACGCGCTGG CGCAGATGCA CGCGCGGGAT CGGTACAACG AGGTGTTGTT TTTGGCGGAT ACGTGTCAGG CGGCGACGCT CGCCAAGGCG ATTCGATCGC CGAGGGTGCT GGCGCTGAGC TCGAGCGGGT TGGGGGAGAA CTCGTACTCG CGGTTTCTCG ATCCCGGGCT CGGCGTGCAC GTGATCGATA GGTTCACGTA TCACGTGTTG GAGTTTTTCG AAAAGCTCAA ACCGGAGAGC GCGAACACGA TGGGCGAGCT CGAGGCGTCG CTCACGCCGG ATAAGTTGAT GTCGCGCGCG GTGTTGGACG TGAAGACGTT CACGCACAGA AACGCGCGCG CGATGAAACT GAGCGAGTTT TTCGGCGCGG TGTGCAAGGC GCGCGCGTTG ACG
|
Protein sequence | NWALIVDASR YWFNYRHGAN ALSMYRSVKR MGIPDSRVVL MLADDHACDA RNPAHGRVYG DEDRGVELYG DDVEVDYRGT EVTPERVIRV LTNRHERGTP RSKKLLPGAR SNVLIYITGH GGDGFIKFQD QTELRAEEIA DALAQMHARD RYNEVLFLAD TCQAATLAKA IRSPRVLALS SSGLGENSYS RFLDPGLGVH VIDRFTYHVL EFFEKLKPES ANTMGELEAS LTPDKLMSRA VLDVKTFTHR NARAMKLSEF FGAVCKARAL T
|
| |