Gene OSTLU_5025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_5025 
Symbol 
ID5005390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009368 
Strand
Start bp97472 
End bp98284 
Gene Length813 bp 
Protein Length271 aa 
Translation table 
GC content62% 
IMG OID640420811 
Productpredicted protein 
Protein accessionXP_001421205 
Protein GI145353834 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5206] Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.450256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0912293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AACTGGGCGC TGATCGTGGA CGCGTCGAGG TATTGGTTCA ATTATCGACA CGGCGCGAAC 
GCGCTGTCGA TGTACAGGAG CGTGAAACGG ATGGGGATTC CGGATTCGCG CGTGGTGCTC
ATGCTCGCGG ACGACCACGC GTGCGACGCG AGGAATCCCG CGCACGGACG CGTGTACGGC
GACGAGGACA GGGGCGTGGA GCTGTACGGA GACGACGTGG AGGTGGATTA CAGAGGGACG
GAGGTGACGC CGGAGCGCGT GATTCGAGTG CTGACGAATC GACACGAACG CGGGACGCCG
CGGTCGAAAA AGTTGCTCCC GGGGGCGCGG AGCAACGTGT TGATATACAT CACGGGACAC
GGCGGCGATG GGTTCATTAA GTTTCAGGAT CAGACGGAGT TGCGGGCGGA GGAGATCGCG
GACGCGCTGG CGCAGATGCA CGCGCGGGAT CGGTACAACG AGGTGTTGTT TTTGGCGGAT
ACGTGTCAGG CGGCGACGCT CGCCAAGGCG ATTCGATCGC CGAGGGTGCT GGCGCTGAGC
TCGAGCGGGT TGGGGGAGAA CTCGTACTCG CGGTTTCTCG ATCCCGGGCT CGGCGTGCAC
GTGATCGATA GGTTCACGTA TCACGTGTTG GAGTTTTTCG AAAAGCTCAA ACCGGAGAGC
GCGAACACGA TGGGCGAGCT CGAGGCGTCG CTCACGCCGG ATAAGTTGAT GTCGCGCGCG
GTGTTGGACG TGAAGACGTT CACGCACAGA AACGCGCGCG CGATGAAACT GAGCGAGTTT
TTCGGCGCGG TGTGCAAGGC GCGCGCGTTG ACG
 
Protein sequence
NWALIVDASR YWFNYRHGAN ALSMYRSVKR MGIPDSRVVL MLADDHACDA RNPAHGRVYG 
DEDRGVELYG DDVEVDYRGT EVTPERVIRV LTNRHERGTP RSKKLLPGAR SNVLIYITGH
GGDGFIKFQD QTELRAEEIA DALAQMHARD RYNEVLFLAD TCQAATLAKA IRSPRVLALS
SSGLGENSYS RFLDPGLGVH VIDRFTYHVL EFFEKLKPES ANTMGELEAS LTPDKLMSRA
VLDVKTFTHR NARAMKLSEF FGAVCKARAL T