Gene OSTLU_47582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_47582 
Symbol 
ID5005415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009368 
Strand
Start bp588748 
End bp590032 
Gene Length1285 bp 
Protein Length428 aa 
Translation table 
GC content62% 
IMG OID640420836 
Productpredicted protein 
Protein accessionXP_001421331 
Protein GI145354097 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.206644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00317201 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCGTCCT CTCCCGCGCC GGCCGTGCTG ACGTTCCAGA CGTTTCTGGA AAAAATGCGT 
CAACCGAGCG CCGGCGCGCT CGTGCGCGAC GTCAAGACGT TCATCGCGAG CCTCGACGAC
GACGCCTCGA CGACGACGAC GACGGTTGAT GGCGAAGACG ACGATGATGG CGACGACGAC
GCGATCCTGC GCGTGGCGCG GCGCGTGCAG ACGTTCCTGC GCGACACGGA GGCGACGTTC
GAGCGACACC CGGCGTGGCG AGGGGCGTCG ATGGCGGAAT TGGACGCGTC GGGGGAGGGA
TTGGAAAAGT ACGTCATGAC GAAGGCGCAC GCGGGCGTCT TCGCGAGACG ACGCGAAGAT
CGAGCGCGGG ACGAAAGGCT GGCGAAACGC GTGGAGACGC TGAAGAAAAT AATAGAACCG
AAACATCTGG ACATCGGGGA GTGCAGCGCG TCGTGGGCGC TGGCGGAGGT GGAGTTGGGG
AAGATGAATC AGTTCAAGGC GCCGCGGGAT AAGTTGGTGT GCGTGTTGAA TACGTGTCGA
ATAATCAATA ATACGCTGAC GACGCGGCAG GGTTCGGACG GGGGGGCGGA CGATTTCTTG
CCGGTGTTGA TTTACGTCGC GATGCGAGCG AATCCGGGGC GGTTGGAGAG TAATTTAAAG
TACATTCAGA GATTTCGCGG CGAGTCGCGA TTGGTGAGCG AGGCGGCGTA CTTTTTCACC
AACCTCGTGA GCGCGGCGCG GTTTTTGGGG CGATGTGCGG CGAACGATTT CACAAACATG
GATGTCGAGA TGTTTGAAAG GGTGATGAAC GAGGACGGGG TGTTGGCGAG CGTGGATTTA
GACGAAGACG AGGAAATAGC GGAGACGCCG GTCGAGGCGG CGTCGGCGGA GAACCCGCCG
CCGTCCACGC CGCCGCCGCA GATTTCGGTC GAGGAGATGA GCGCGGCGTT GAGCGCGCTC
GAAGGTGGGG ACACGTCGAC GACGCCCAGG GAAATACCGA AGAACGCTGG CGGTGGCGTC
GGCGACTACG CGACCGACGA CGATAATTTG CACACGCCGA CGTCTCGCGC CGCGGCGCCG
TACGTTCCGT GGCGCACGAC CGAGGACGTC GAAGCCGAGG GCGCGACGCA ACTCACCGCG
CTCGACGTCG CTGGAAACTT GACTTTGAGT TCGGACTATA AGTTTCTGTA CGCCAAGGTG
GAAGACTTGA CCGTCGGCGA CGTCGCGAGG TTGCTTCACG ACTACAAAGG ATTGGCGCTG
CAGTACGAAA GCCTCAGTCG AGGCG
 
Protein sequence
MSSSPAPAVL TFQTFLEKMR QPSAGALVRD VKTFIASLDD DASTTTTTVD GEDDDDGDDD 
AILRVARRVQ TFLRDTEATF ERHPAWRGAS MAELDASGEG LEKYVMTKAH AGVFARRRED
RARDERLAKR VETLKKIIEP KHLDIGECSA SWALAEVELG KMNQFKAPRD KLVCVLNTCR
IINNTLTTRQ GSDGGADDFL PVLIYVAMRA NPGRLESNLK YIQRFRGESR LVSEAAYFFT
NLVSAARFLG RCAANDFTNM DVEMFERVMN EDGVLASVDL DEDEEIAETP VEAASAENPP
PSTPPPQISV EEMSAALSAL EGGDTSTTPR EIPKNAGGGV GDYATDDDNL HTPTSRAAAP
YVPWRTTEDV EAEGATQLTA LDVAGNLTLS SDYKFLYAKV EDLTVGDVAR LLHDYKGLAL
QYESLSRG