| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_47438 |
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| Symbol | |
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| ID | 5005348 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009368 |
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| Strand | + |
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| Start bp | 189918 |
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| End bp | 192088 |
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| Gene Length | 2171 bp |
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| Protein Length | 650 aa |
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| Translation table | |
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| GC content | 58% |
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| IMG OID | 640420769 |
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| Product | predicted protein |
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| Protein accession | XP_001421229 |
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| Protein GI | 145353884 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00617] replication factor-a protein 1 (rpa1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.53124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0322988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGCCGCGCGC GCCCGAGCGC ACGCGCGATG CCGCCCGCGC TGACGCCGAA CGCGATATCC
AATATTCTCG AACAGACCCA CGGATCGCAG GACTTCAAAC CCATCGTCCA AGTGTTCGAT
CTGAAGGAAT TGAAAACCAA ACCCGACGCC GACGACGCCG CGAAGCGATT CCGCGTCCTC
GCGTCCGACG GTGGATTCGC GGCGCAGGGA TTGTTCGGGG CGGAGTTGAA CGCGATGTGC
GAGCGAGGGG AAATTACGAA ATTCACGGTG CTGCGGTTGA GAGAGTACAT CGTGAACGAT
CTGAACGGGA GACGGTGCGT GCGCGAGATG GGTTGGGATG GGCGGCGCGG CGCGGCGCGG
CGCGGCGCGA GGGGCGAGAC GAGACGCGCG AGGATGGAGA CGCGCGATCG AGGGATCGCG
ATGATCTTGG ATGGAAGCGA GGAAGGCGGC GCGATGCGCG AGGGGGGTGA CTGACGATCG
TGCGAACGGA CGAATGGTTT GAACGTAGGA TTTTGATCGT CATGGACGCC GAGGTGATGG
ATCGGTACGA CGCCGTCATC GGACAGCCGC GGGTGTGGCA GCCGGGGACT GGGACGAACG
CGTCGACGGG GATGAACGCG GGGGGGATGC AACAGCAAAG AAACGCGTAC GGAGGAGCGC
CGGCGGCGCA GGTGGAAGGC TACGGGTCGG GTGGAGGGAA CGGCGCGAAT CTGGCGACGG
AACCGCCGCG CGCGAGCGGT GGCGGGTACG GTGGCGGCGC GCCGGCGGCG CAGGGGCAGT
ATCGTCGAGA TGGTGGCGCG GTGGCGCGCA ATGAGCAGCC GAGGTCCATC ACGCCGATCC
ATGCGTTGAA CCCGTACCAG AACCGTTGGA CTATTCGCGC GCGAATCACG ACTCCGTTGG
AGTTGCGCTC GTATTCGAAT GCGAAAGGCG AAGGTAAGGT GCTCGGCTTT CAAGTGCTCG
ATGCCGACGG AACGGAGATC AAGTGCGTGT GCTTTAACGA CACCGCCGTG CGCCTCGCGG
GGGAGTTACG TCAAGGCTTG GTGTACGAAA TTTCCAAGGG AGCAATCGTC ACGCCGCGCG
ACCCGCGGTA CGCGATTTAT CAGTACGAAA TTAAGTTGGA TAACCACGCG ACGTTCGTGC
CGTGTCCAGA CGCCGAACGC GACATCAAGA AGATGGTATA CAAGTTCAAG AAGCTTTCTG
AACTCGACGC GCTCAACGCC GGAGATATGG TGGATGTCAT TGGCATCGCA TACTCTGTGG
GTGATTTGAC GACGATCATG AAGCGCGACG GTTCCGAAAC TTCGAAGCGT TCTGTGATGA
TTCGCGACGA CTCGGACACA TCCATCGAGT TCACGCTTTG GGATCCGCAC TCAGTCGAGA
TTGGCGGGCA AATCGAAAGC TTGATCGCTA GCGGCGAAAA ACCCGTCATC GCGGTGAAGA
GCTCTCGATT GGGCGAGTTC CAAGGCAAGA ACATGGGCAC CGTGAGCAGC ACGATGGTAG
AAATAAATCC CGACAGTTCC GAGGCGACGC GCATGCGCGT TTGGTTTGAT CAAGGCGGCG
CCGATAAAAC TTTCAACTCC TTGAGCGGTT CTGGCGGTGG CGGCGGCAAA GGCAGTGGTG
AATTGCTCTC GTTCTCGACT GTGAAAGAGA TCGGTGAAGA ACTCGTGGCT AAAAATGAGG
GCGTGGCGTA CCTGAGTTGC TGCGGTATCA TAAAGCACAT CAAACTCGGC GCGGAAGGTA
ACTTCTATCC CGCGTGTCCG TTGCTTAATG GTGAACGCAC GTGCCAAAAG AAGCTGCGTA
AAGATGACTC GACTGGTGAA TGGAAGTGCG AACGTCACGC CGGTGAAAAA ATCGAAGCCG
CGGATTGGCG TTACATGTTT AGCATGGTTT GCATGGATCA CAGCGATGAG TATTGGGTGA
GCGTTTTCGG TGACAAGGGT GACAAGATTT TCGGGATAAG CGCCGCTGAA ATGAAGGAAA
TCTACGACCG TGAACCGGAG CGATACGAAA ACATGATCAG TGACGCACTG TTCAACGATT
ACTCTCTACG CGTTAAGGTC GCCGTTGACA ACTACACCGA CGTACCCCGC GCCAAGGGCA
GCTTGGTTGA AATCGAGCGC GTCAACTACG TAGACATGAG CAAGAAGTTG ATCGGCAAGA
TTGCAAAGCT T
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| Protein sequence | MPPALTPNAI SNILEQTHGS QDFKPIVQVF DLKELKTKPD ADDAAKRFRV LASDGGFAAQ
GLFGAELNAM CERGEITKFT VLRLREYIVN DLNGRRILIV MDAEVMDRYD AVIGQPRVWQ
PGTGTNASTG MNAGGMQQQR NAYGGAPAAQ VEGYGSGGGN GANLATEPPR ASGGGYGGGA
PAAQGQYRRD GGAVARNEQP RSITPIHALN PYQNRWTIRA RITTPLELRS YSNAKGEGKV
LGFQVLDADG TEIKCVCFND TAVRLAGELR QGLVYEISKG AIVTPRDPRY AIYQYEIKLD
NHATFVPCPD AERDIKKMVY KFKKLSELDA LNAGDMVDVI GIAYSVGDLT TIMKRDGSET
SKRSVMIRDD SDTSIEFTLW DPHSVEIGGQ IESLIASGEK PVIAVKSSRL GEFQGKNMGT
VSSTMVEINP DSSEATRMRV WFDQGGADKT FNSLSGSGGG GGKGSGELLS FSTVKEIGEE
LVAKNEGVAY LSCCGIIKHI KLGAEGNFYP ACPLLNGERT CQKKLRKDDS TGEWKCERHA
GEKIEAADWR YMFSMVCMDH SDEYWVSVFG DKGDKIFGIS AAEMKEIYDR EPERYENMIS
DALFNDYSLR VKVAVDNYTD VPRAKGSLVE IERVNYVDMS KKLIGKIAKL
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