Gene OSTLU_43397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_43397 
Symbol 
ID5005583 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009368 
Strand
Start bp374568 
End bp375333 
Gene Length766 bp 
Protein Length186 aa 
Translation table 
GC content63% 
IMG OID640421004 
Productpredicted protein 
Protein accessionXP_001421456 
Protein GI145354362 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGACG ACGCGCGCTC GTACTGGGAC GCCTTCGTCG CGTGGTTGCG CGCGCTGTTC 
TTCGGACGCG AGATGGAGAT CGTCGTGATC GGTGCGTCGA GCGACGCCGA CGACGACGCG
AGGCGACGCG CGAGACGCGG CGCGCGAGAC GCGGCGCGCG CGAGAGCGAT TTAAGATGGC
GGTTGCGTCG GACTTTGATT TGAATCGCGA CGAAACGAAT TCGATCGCGC GCGAGGACGG
CGCGGGGACG CGCGCGCGGG GACTGACGAA GACGTTTCGC GAACGCGCGC GCGCAGGGCT
GCAGAACGCC GGGAAGACGT CGTTCATCGA CGCGCTGAGC GGCGGGACGT TTGAGGAGGA
TATGATTCCG ACGGTGGGAT TCAACGTGCG GAGACTGCGT AGGGATGGGG TGAGCGTGAA
GACGTGGGAT CTCGGTGGAC AGGAACGGTT TCGGGGAACG TGGGAACGGT ACTGTCGAGG
CGTGGATTGC GTGGTGTACG TCGTGGATGC GGCGGCGAAG GAATTGTTTG AGACGGCGAG
GAACGAGCTG CACGGGTTGC TCAAGAGGGA GACGCTGCGG GAGATTCCGT TGTTGGTGCT
CGGGAATAAG AGCGATTTAG AGAGCGCGGT GCGCGTGCAG GACGTGGTGG AGGCGATGGA
GCTGAAACGC GCGACCGGGA GGGAGGTGTG CTGCTACAAC GTGAGTTGCA AGAATTCCAC
AAACATCGAC GTGTGCCTGA AATGGCTCAC CGCGCACGCG AAATAG
 
Protein sequence
MGDDARSYWD AFVAWLRALF FGREMEIVVI GLQNAGKTSF IDALSGGTFE EDMIPTVGFN 
VRRLRRDGVS VKTWDLGGQE RFRGTWERYC RGVDCVVYVV DAAAKELFET ARNELHGLLK
RETLREIPLL VLGNKSDLES AVRVQDVVEA MELKRATGRE VCCYNVSCKN STNIDVCLKW
LTAHAK