Gene OSTLU_43387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_43387 
Symbol 
ID5005584 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009368 
Strand
Start bp380091 
End bp380608 
Gene Length518 bp 
Protein Length115 aa 
Translation table 
GC content58% 
IMG OID640421005 
Productpredicted protein 
Protein accessionXP_001421277 
Protein GI145353985 
COG category[A] RNA processing and modification
[D] Cell cycle control, cell division, chromosome partitioning
[K] Transcription 
COG ID[COG5147] Myb superfamily proteins, including transcription factors and mRNA splicing factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACTC GGAGTGGACA ACAGTGCGCA CAGCGGTGGC GACACAAGGT CAACCCAGGG 
ATCCGACGGG AGCGGTGGAG CGAGGAGGAG GATGAAAAGG TGCGAATGCG GTTCGATAAC
GTGAGCAAAT GATATTGGTT ACATGCGTTG TGTGCGCAGA ACACAATTTT GGTCGCGTGG
CGGGAGAGAT ATCGTCGAGT GGTCCCGCGC GGTCCCGCGT CGTCTCAAAC GATTTGACTG
GACGAAGAGA GCGATTTGAT TTGACGTGAC AGTTGAAGAC ACTGAAAGAG CGCTACGGGT
CGAGATGGGC AACGATCGCG CGTGAAATGG GTGGTCGCAC GGATCAGCAA TGTATGGGAC
GGTGGAGACG ACATCTCGAT CCGACAGTGA CTCGCGGCGC GTGGGCTCGG GACGAAGACG
AGCTCTTGTG CGGGTTGTAC GACGAGTACG GTCCGCGATG GTCATTCATC TGTCAGAGCG
TTCCGGGTCG CACCGCGCAA CAATGTCGCG CGCGATGG
 
Protein sequence
MGTRSGQQCA QRWRHKVNPG IRRERWSEEE DEKLKTLKER YGSRWATIAR EMGGRTDQQC 
MGRWRRHLDP TVTRGAWARD EDELLCGLYD EYGPRWSFIC QSVPGRTAQQ CRARW