| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_43365 |
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| Symbol | |
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| ID | 5005310 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009368 |
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| Strand | + |
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| Start bp | 332774 |
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| End bp | 334914 |
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| Gene Length | 2141 bp |
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| Protein Length | 649 aa |
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| Translation table | |
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| GC content | 58% |
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| IMG OID | 640420731 |
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| Product | predicted protein |
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| Protein accession | XP_001421265 |
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| Protein GI | 145353961 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00617] replication factor-a protein 1 (rpa1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.895959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0131975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCCG CGCTGACGCC GAACGCGATA TCCAATATTC TCGAACAGAC CCACGGATCG
CAGGACTTCA AACCCATCGT CCAAGTGTTC GATCTGAAGG AATTGAAAAC CAAACCCGAC
GCCGACGACG CCGCGAAGCG ATTCCGCGTC CTCGCGTCCG ACGGTGGATT CGCGGCGCAG
GGATTGTTCG GGGCGGAGTT GAACGCGATG TGCGAGCGAG GGGAAATTAC GAAATTCACG
GTGCTGCGGT TGAGAGAGTA CATCGTGAAC GATCTGAACG GGAGACGGTG CGTGCGCGAG
ATGGGTTGGG ATGGGCGGCG CGGCGCGGCG CGGCGCGGCG CGAGGGGCGA GACGAGACGC
GCGAGGATGG AGACGCGCGA TCGAGGGATC GCGATGATCT TGGATGGAAG CGAGGAAGGC
GGCGCGATGC GCGAGGGGGG TGACTGACGA TCGTGCGAAC GGACGAATGG TTTGAACGTA
GGATTTTGAT CGTCATGGAC GCCGAGGTGA TGGATCGGTA CGACGCCGTC ATCGGACAGC
CGCGGGTGTG GCAGCCGGGG ACTGGGACGA ACGCGTCGAC GGGGATGAAC GCGGGGGGGA
TGCAACAGCA AAGAAACGCG TACGGAGGAG CGCCGGCGGC GCAGGTGGAA GGCTACGGGT
CGGGTGGAGG GAACGGCGCG AATCTGGCGA CGGAACCGCC GCGCGCGAGC GGTGGCGGGT
ACGGTGGCGG CGCGCCGGCG GCGCAGGGGC AGTATCGTCG AGATGGTGGC GCGGTGGCGC
GCAATGAGCA GCCGAGGTCC ATCACGCCGA TCCATGCGTT GAACCCGTAC CAGAACCGTT
GGACTATTCG CGCGCGAATC ACGACTCCGT TGGAGTTGCG CTCGTATTCG AATGCGAAAG
GCGAAGGTAA GGTGCTCGGC TTTCAAGTGC TCGATGCCGA CGGAACGGAG ATCAAGTGCG
TGTGCTTTAA CGACACCGCC GTGCGCCTCG CGGGGGAGTT ACGTCAAGGC TTGGTGTACG
AAATTTCCAA GGGAGCAATC GTCACGCCGC GCGACCCGCG GTACGCGATT TATCAGTACG
AAATTAAGTT GGATAACCAC GCGACGTTCG TGCCGTGTCC AGACGCCGAA CGCGACATCA
AGAAGATGGT ATACAAGTTC AAGAAGCTTT CTGAACTCGA CGCGCTCAAC GCCGGAGATA
TGGTGGATGT CATTGGCATC GCATACTCTG TGGGTGATTT GACGACGATC ATGAAGCGCG
ACGGTTCCGA AACTTCGAAG CGTTCTGTGA TGATTCGCGA CGACTCGGAC ACATCCATCG
AGTTCACGCT TTGGGATCCG CACTCAGTCG AGATTGGCGG GCAAATCGAA AGCTTGATCG
CTAGCGGCGA AAAACCCGTC ATCGCGGTGA AGAGCTCTCG ATTGGGCGAG TTCCAAGGCA
AGAACATGGG CACCGTGAGC AGCACGATGG TAGAAATAAA TCCCGACAGT TCCGAGGCGA
CGCGCATGCG CGTTTGGTTT GATCAAGGCG GCGCCGATAA AACTTTCAAC TCCTTGAGCG
GTTCTGGCGG TGGCGGCGGC AAAGGCAGTG GTGAATTGCT CTCGTTCTCG ACTGTGAAAG
AGATCGGTGA AGAACTCGTG GCTAAAAATG AGGGCGTGGC GTACCTGAGT TGCTGCGGTA
TCATAAAGCA CATCAAACTC GGCGCGGAAG GTAACTTCTA TCCCGCGTGT CCGTTGCTTA
ATGGTGAACG CACGTGCCAA AAGAAGCTGC GTAAAGATGA CTCGACTGGT GAATGGAAGT
GCGAACGTCA CGCCGGTGAA AAAATCGAAG CCGCGGATTG GCGTTACATG TTTAGCATGG
TTTGCATGGA TCACAGCGAT GAGTATTGGG TGAGCGTTTT CGGTGACAAG GGTGACAAGA
TTTTCGGGAT AAGCGCCGCT GAAATGAAGG AAATCTACGA CCGTGAACCG GAGCGATACG
AAAACATGAT CAGTGACGCA CTGTTCAACG ATTACTCTCT ACGCGTTAAG GTCGCCGTTG
ACAACTACAC CGACGTACCC CGCGCCAAGG GCAGCTTGGT TGAAATCGAG CGCGTCAACT
ACGTAGACAT GAGCAAGAAG TTGATCGGCA AGATTGCAAA G
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| Protein sequence | MPPALTPNAI SNILEQTHGS QDFKPIVQVF DLKELKTKPD ADDAAKRFRV LASDGGFAAQ
GLFGAELNAM CERGEITKFT VLRLREYIVN DLNGRRILIV MDAEVMDRYD AVIGQPRVWQ
PGTGTNASTG MNAGGMQQQR NAYGGAPAAQ VEGYGSGGGN GANLATEPPR ASGGGYGGGA
PAAQGQYRRD GGAVARNEQP RSITPIHALN PYQNRWTIRA RITTPLELRS YSNAKGEGKV
LGFQVLDADG TEIKCVCFND TAVRLAGELR QGLVYEISKG AIVTPRDPRY AIYQYEIKLD
NHATFVPCPD AERDIKKMVY KFKKLSELDA LNAGDMVDVI GIAYSVGDLT TIMKRDGSET
SKRSVMIRDD SDTSIEFTLW DPHSVEIGGQ IESLIASGEK PVIAVKSSRL GEFQGKNMGT
VSSTMVEINP DSSEATRMRV WFDQGGADKT FNSLSGSGGG GGKGSGELLS FSTVKEIGEE
LVAKNEGVAY LSCCGIIKHI KLGAEGNFYP ACPLLNGERT CQKKLRKDDS TGEWKCERHA
GEKIEAADWR YMFSMVCMDH SDEYWVSVFG DKGDKIFGIS AAEMKEIYDR EPERYENMIS
DALFNDYSLR VKVAVDNYTD VPRAKGSLVE IERVNYVDMS KKLIGKIAK
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