| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_43144 |
|---|
| Symbol | |
|---|
| ID | 5005428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009368 |
|---|
| Strand | - |
|---|
| Start bp | 629151 |
|---|
| End bp | 630843 |
|---|
| Gene Length | 1693 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 640420849 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421519 |
|---|
| Protein GI | 145354496 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0420] DNA repair exonuclease |
|---|
| TIGRFAM ID | [TIGR00583] DNA repair protein (mre11) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.275751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.938333 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACCGG CCGCGGGGGT GAAACCGCCC GATGCGAACA CGCTGCGCGT GCTCATCGCC
ACGGACACGC ACCTGGGCGC GCACGAGCGC GATCCGATTC GAAAAGATGA CGCGTTTTTA
GCGTTTGAAG AAATCTTCGA TCACGCGAGA AAACAACTCT GTGATTGCGT GTTTCTCGCG
GGAGACGTGT TCGACGTGAA TAAACCGAGC CGAGAGACGC TGGTGCGGTG CATGGACGCG
CTGCGGGAGG CGACGCGAGG GAATAAAGGG ATCGAGATTG AAGTTTTGAG CGATGGGAAG
GAAAACTTTC CGAGTCGAGG TGCGCGCGAA GCGAGGCGAA GACGAGGTCG AAACGATGAC
TGACGGCGCG GATGCGGGAA AATCAGGCAT GGCGAATTAT GAGGATCCGA ATTGTAACGT
GTCGTTGCCG GTGTTTAGCA TACACGGGAA TCACGACGAT CCCGCGGGGG AGGCGAATTT
GAGCGCGATG GACGTGCTCG CGAGCGCGGG ATTGGTGAAT TATTTCGGCA AGCACGCGCT
CGGTGGGGGG GGAGCCGGTC GCGTGGACTT GAAGCCGGTA TTGTTACGTA AAGGACAGAC
TAAGGTGGCG CTGTACGGGT TGGGATACAT TCGCGATAAT CGTTTACATC AAATGTTTAG
CGTCAAGGGA TGCGTGCGAT GGCATCGACC GGCGGAGACG GAGGATTGCT CGTCGAGTTC
GTGGTTTAAC GTGATGTTGA TTCATCAAAA TCGAGCCGCG CATTCGAAGA ATGCGATTTC
CGATCGTTAC TTGCCGAGTT GGTTGGATTA CGTCGTTTGG GGGCACGAGC ACGAGTGTTT
AGTGGAGCCA ACCGAGAGCG CGCAGGGATT TCACGTGTCG CAACCGGGAT CGAGCGTGGT
GACGTCTTTG ATTGAAGGCG AGGCGAAGGA GAAGAAGATT TGCGTGCTCG AAGTGCGAAG
TGATCCGGAG AATCCGAATA GCGCGCCATT CTGGCGCACG ACGCCCATCA CCTTGCGAAC
GACGCGACCG TTCGAGTTTG AGCAAATGAC GTTGGCGAAC ACGCCCGAGC TCGAAGGCGC
GGATGCCCAA GGCGTGGCGA CGTATCTGGA GAACCGCGTG AACGCCATGA TAGTCCGGGC
GGGGCGCAAG CATAGAGAAC GACACGCGAA AAATGGGAGA GACGATGTCG ACATGCTCGA
CCGCTTGAAT TTGCCTTTGA TTCGTCTGCG CGTGGATTAC TCGGGCGGCT TTAGCACCAT
CAATCCGCAG CGCTTCGGTC AAAAGTTTGT CGGCAAGGTG GCGAATCCGC ACGATGTTTT
GCTCTTTCAT AAATCTCAAA AGAAGCAACG TCGCGATGGC GTGGACGTGG ATGAAGACAT
GATCGATGAG GAGGCGGCGG CGTTGGAGGA GGAAGACGCC CTCGCCGATG GCATGCTCGA
GAATCAACGA CGAATCGATC GACTCGTGCG CGAACACTTG TCGACGAGCG ACGGTTTACA
ACTTCTCACA CCTAACGATC TCTCCGCCGC GCTCGACGAT TTCGTCAATC GCGACGAAAA
GGCGGCGATT TCCAAGCTTT GTCAAACGCG CTTAAAGGCG GTGCAAACAT CGGTGAATGC
GGATGATCAA GAAAACACCG ACGACGTCGA TCGATTGACT TCGAAGATTT ACGAAGCCGT
GAAGGTGCAG TTA
|
|---|
| Protein sequence | MRPAAGVKPP DANTLRVLIA TDTHLGAHER DPIRKDDAFL AFEEIFDHAR KQLCDCVFLA
GDVFDVNKPS RETLVRCMDA LREATRGNKG IEIEVLSDGK ENFPSRGMAN YEDPNCNVSL
PVFSIHGNHD DPAGEANLSA MDVLASAGLV NYFGKHALGG GGAGRVDLKP VLLRKGQTKV
ALYGLGYIRD NRLHQMFSVK GCVRWHRPAE TEDCSSSSWF NVMLIHQNRA AHSKNAISDR
YLPSWLDYVV WGHEHECLVE PTESAQGFHV SQPGSSVVTS LIEGEAKEKK ICVLEVRSDP
ENPNSAPFWR TTPITLRTTR PFEFEQMTLA NTPELEGADA QGVATYLENR VNAMIVRAGR
KHRERHAKNG RDDVDMLDRL NLPLIRLRVD YSGGFSTINP QRFGQKFVGK VANPHDVLLF
HKSQKKQRRD GVDVDEDMID EEAAALEEED ALADGMLENQ RRIDRLVREH LSTSDGLQLL
TPNDLSAALD DFVNRDEKAA ISKLCQTRLK AVQTSVNADD QENTDDVDRL TSKIYEAVKV
QL
|
|---|
| |