Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_43113 |
Symbol | |
ID | 5005276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009368 |
Strand | + |
Start bp | 506812 |
End bp | 508143 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | |
GC content | 53% |
IMG OID | 640420697 |
Product | predicted protein |
Protein accession | XP_001421301 |
Protein GI | 145354034 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5021] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.021277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00922136 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGCTCG AGCCAGCAGT CGCCGCGTCG GCTTTGCAAT CACAAATCGA CGGCGGCGCG CCGACACAAA TCACGGGTTT GCTGAACGAT TGTCCACATG CTTTGTCCTT CGACGAACGA GTGAAGATAT TTCGTGAACT CATCAAGGCC GACAGACTCA AGGCTGGATA TAGACCACAA GCCGGCGGTG CGGACGCGGC GCACGGCGAT ACATTTGCGC GGCCGGTGGC GCAGGTGACA CTGCGACGCG AGAGCGTACT AGAGGATACG CTCACGTCAG TTTTACCTCT CGGTGCGAAA GCTCGAGGAC GCATACTCGT GAAATTCGTC AACGCTGCGG GTCAAGAAGA GGCTGGCATT GACGCCGGAG GTTTATTCAA AGAGCTCCTC AGTCAAGTCA CCGAACAAGG CCTCGACCCG AACCGCGGGT TGTTTCAGTC CAACGCCACT GGACTGATTT ATCCGAGCCC TCGCGCAGGA GACACGCACG AAGGGATATT GCTTCTTGAG ATGATTGGAA TGATGATCGG AAAGGGAATG TACGAAGGTA TTTTGCAGGA CATAAACATG GCACCATTCT TCGCGGCGCA CGTTTTGGGA ACAGCGCGAA CGATTGACGA CATTCCCAGC CTTGATGAAG ATCTGGCGCG ATCGATCGTA CAAATATTAG AATATGAAGG TGATGTCGCC GATCTGTGTT TAGACTTCAC TTGCAGCGAA GAGATTTATG GCGAGCTTGT GACCAGAGAA CTCGTCGCCG GCGGGAGAGA CGTTGAAGTG ACGGCGGCGA ACAAATTATT CTACGTCTTC TCACTAGCAG ATTACCACTT GAATCGACGC ATTGCGACGC CAATGCTCGC TTTCATGCGA GGTCTAACGA AAATCATCAA TCAACGCTGG CTCAGGCTGT TCAATGTGAC AGAGTTGAGT CTACTTCTCA GCGGCGGTGA ATCCGCGATA GACGTCGACG ATTGGGAGCT CCACACAAGA TACTCGGGTG GATATTCGTC CTCGAGCGCG ACGGTGCGCA ACTTTTGGCG CGTGATGCGA AAATTTACCC CAAAACAGCG CCAAGACGTC TTAAAATTCG TTACGTCGTC ACCAAGACCA CCGCTCCAAG GATTCAAGCA CCTCAATCCG CCCTTTGTCA TTCACAAAGT TCGCTGTGAG GCTTCGATGT TCGCCTACTT CGGCGCTACC GACGTGCGTC GCCTTCCCAG CGCCAGCACG TGTTTCAATA TGCTCAAGCT TCCAAATTAC CGCCGCGCGT CGACGCTGGA AAAATCCGTG TCGTACGCCT CGCAATCTCG AGCCGGTTTC GAGCTTAGTT AA
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Protein sequence | MELEPAVAAS ALQSQIDGGA PTQITGLLND CPHALSFDER VKIFRELIKA DRLKAGYRPQ AGGADAAHGD TFARPVAQVT LRRESVLEDT LTSVLPLGAK ARGRILVKFV NAAGQEEAGI DAGGLFKELL SQVTEQGLDP NRGLFQSNAT GLIYPSPRAG DTHEGILLLE MIGMMIGKGM YEGILQDINM APFFAAHVLG TARTIDDIPS LDEDLARSIV QILEYEGDVA DLCLDFTCSE EIYGELVTRE LVAGGRDVEV TAANKLFYVF SLADYHLNRR IATPMLAFMR GLTKIINQRW LRLFNVTELS LLLSGGESAI DVDDWELHTR YSGGYSSSSA TVRNFWRVMR KFTPKQRQDV LKFVTSSPRP PLQGFKHLNP PFVIHKVRCE ASMFAYFGAT DVRRLPSAST CFNMLKLPNY RRASTLEKSV SYASQSRAGF ELS
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