Gene OSTLU_42939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42939 
Symbol 
ID5005300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009368 
Strand
Start bp576027 
End bp576956 
Gene Length930 bp 
Protein Length309 aa 
Translation table 
GC content68% 
IMG OID640420721 
Productpredicted protein 
Protein accessionXP_001421326 
Protein GI145354086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.022844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.110543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCG GCGGCGCGTC GCGCGTCGCG GTGCTCGCGC TCATCGCGCT CGCGACGTCG 
GCCGCGCCGC GTCGCGCGAC CGCCGATCGC GCGCGCCTGC CGAGAGACGC GCGCGACGAA
CGATTGGACG ACGACGACGC GCGATTGCGC GCCGAGGAGC ACGTCGCGTA CGCCTCGGAC
GCGCGATCGC GCGTCGGACT GCGACGCGAC GGCGCGGACG CGCGGCAGTG GATCGAGCGA
ATCTCGGAGT CGCCGCGGGC GTACGTGTAC AGAAATTTCC TGACGCGCGA GGAGGCGGAG
GCGACGATCG CGGCGGCGCG GCGGACGATG CGACGGAGCG AGGTGGTGAA CGAGGCGGAC
GGAACGTCGA AGACGAGCGA TGAGAGAACG TCGAGCGGGG GGTGGGTGAG CGGGGAGGAT
TCGGAGGTGA TGGCGAACAT CGAACGACGG GTCGCGGCGT GGACGATGCT GCCGAGAAAT
CGAGGCGAGA CGACGCAGGT GATGCGGTAC GAGGCGGGGC AGGAGTACGC GGCGCACGAT
GATTACTTTC ACGATGAAGT GAACGTGAAG AATGGTGGAC AGCGCGCGGC GACGGTGTTG
ATGTATCTGA GCGACGTCGA GGAGGGGGGG GAGACGGTGT TTCCGCGAGG GACGCCGCTG
GGGGGGGCGG CGCCGGAGAA GAGCGGAGTG ACGCAAGGAA ACGCGTGCGA ACGCGCGTTG
AGGGGAGACC CGAACGTCTT AGCTGTGAAA CCGCGACGCG GAGACGCGCT GCTGTTCTTC
AACGTGCATT TGAACGGCGA AGTCGACGAG CGCGCGCGAC ACGCCGGGTG CCCGGTGGTG
CGCGGGACGA AGTGGACGGC GACTCGCTGG CAGCACGTCG GCGCGCTCAA TATCGGGAGT
TTTGCGCGCA CGGATTCGCA GACGACCTAG
 
Protein sequence
MPRGGASRVA VLALIALATS AAPRRATADR ARLPRDARDE RLDDDDARLR AEEHVAYASD 
ARSRVGLRRD GADARQWIER ISESPRAYVY RNFLTREEAE ATIAAARRTM RRSEVVNEAD
GTSKTSDERT SSGGWVSGED SEVMANIERR VAAWTMLPRN RGETTQVMRY EAGQEYAAHD
DYFHDEVNVK NGGQRAATVL MYLSDVEEGG ETVFPRGTPL GGAAPEKSGV TQGNACERAL
RGDPNVLAVK PRRGDALLFF NVHLNGEVDE RARHAGCPVV RGTKWTATRW QHVGALNIGS
FARTDSQTT