Gene OSTLU_27472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_27472 
SymbolRPL27aB 
ID5005316 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009368 
Strand
Start bp347518 
End bp348510 
Gene Length993 bp 
Protein Length147 aa 
Translation table 
GC content63% 
IMG OID640420737 
ProductRibosomal protein L27aB, component of cytosolic 80S ribosome and 60S large subunit 
Protein accessionXP_001421267 
Protein GI145353965 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGCGAAAGCC GACGCTCTTT CGAGATGCCG ACGAGGTGCG GGCGATGAAA CGGCGAGCGA 
TGCGATGCGT TCGATCGGGC GCGACGTCGC GGCGCGCGCG CGGTCGCGCG CGCGACGGGA
GGGGCGAACG CGGCGTGGAC GCGATGGCGA GCCCTAGCGA TCGGTGTGCG GCGTGGACGC
GCCCGGGCGA GCGGCGCGAA CGCGCGCGGG CGCTCGCGCG CGCGCGGTTG GGCGTGCGGG
ATTGCGATGC GTCGTTTCGA GGCGCGCGCG GGCGGGCGTG CGGGGGAGAC GCGCGCGTTC
GACGCGCGCG TTCGGCGCGT TCGGAGGCTT TAGGGTTTTT AGGAGGACTC GACGCGGGAC
GCGTCGCGGA GCGCGCGGCG CGGTGGTTCG CGCGATGGCG CGAGAGCGAT GGAAAAACTT
CGGAGAATCG TCGACTGACC GAGGACGTGT GTTTGTTTGC GCGCGCGATT AGGTTGCATA
AGAACCGCAA GAAGCGCGGG CACGTGTCCG CGGGTCACGG CCGTATCGGT AAGCACCGCA
AGCACCCGGC GGGTCGCGGT ATGGCGGGTG GTCAACACCA TCACAGAATT ATGATGGATA
AGTATCACCC GGGTTACTTC GGTAAGGTTG GTATGCGTCA CTTCCACAAG CTCAAGAACC
ACTACCACTG CCCGACCATC AACATTGACA AGCTTTGGAC GCTCGTCGGC GAGGAGAAGC
GTGAGGAGTG CGCCAAGAAC ACGTCTCAAG CGCCGGTGAT TGATCTCACT GATCACGGTA
TCTTCAAGCT TCTCGGTAAG GGTCAACTCC CGAGCCAACC GGTCGTGGTG AAGTGCCGTT
ACATTAGCAA ACTCGCCGAA AAGAAGATCA AGGATGTCGG CGGCGCGTGC ATTCTCACCG
CGTAAAGGGC GTCTCTCGAA TTCGGGTTCG TCTTCTGGGT AGTCTGGGAT TAGTACCGCG
CGTTGTTATG AGTAACATTC ATCTCACGCG TTC
 
Protein sequence
MPTRLHKNRK KRGHVSAGHG RIGKHRKHPA GRGMAGGQHH HRIMMDKYHP GYFGKVGMRH 
FHKLKNHYHC PTINIDKLWT LVGEEKREEC AKNTSQAPVI DLTDHGIFKL LGKGQLPSQP
VVVKCRYISK LAEKKIKDVG GACILTA