| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_27426 |
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| Symbol | HMA1 |
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| ID | 5005514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009368 |
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| Strand | - |
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| Start bp | 246663 |
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| End bp | 249656 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | |
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| GC content | 59% |
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| IMG OID | 640420935 |
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| Product | P-ATPase family transporter: cadmium/zinc ion; heavy metal translocating P-type ATPase family-like protein |
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| Protein accession | XP_001421427 |
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| Protein GI | 145354301 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.040121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.339459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG ACGAGGACGA GTTCGTGTCG CAGGCGGGGA TGATGGCGGC GACGAGCTCC
GGGGAGTTTG CACCGCGCGG ACGCACGGAG AGGGCGCTGG ATGCGATGTT TAACGCCACT
GGTTTGCACG CGGTGGCGGA TTTCCTGCGC GGGAACGCGG CGGTGGCGGT GGTGTCGTGG
GCGCTGTTTC TCGTCGCGGG GGCGGCGCAC GTGGCGACGC ACGTCGGCGG CGGCGGATTG
GTGGAGACGA CGATGGCGGC GAACGTCAGT CGGGTGTGCA CGATTCTGGT TTACGTGTTG
GCGGGGACGC CCGAGTTTGT GGACGTGACG TACGAGCTCG CGGTGGGGAA CGTGAACATT
CACGTGCTCA CGACGTTGGC CGTGTTCGGC ACCGTGCTCT TGGGGTGCGC GATGGAGGGC
GCGCTGCTCT TGGTGCTCTT CGCCCTGGCG CACTTCGTGG AGGATCGATT GACGCTGCAC
GCTCGGGGGG ATTTGAAGGC GTTGTGGGGC ACGGTGCCCA CGACGGCGGA CGTCGTGCAG
TTGCTCGCCG ATGGGACGCC GGATTTGACG ACGCTCCGAG AGATGCCCGC GGCGGACGTC
GACGTTGGGA CGATGATTTT CGTCAAGGCT GGACAGCAAG TGCCGTTGGA TGGTATGGTT
GTCCACGGCA GCGCGTTAGT GAGCATTCAA CACATCACCG GTGAGGCTTT GCCGGTGATG
AAGAGATACG GCGATGAGAT TCCCGCCGGC GCGATGAACA CCGACGGCGT GCTCGTGGTG
AAGAGCTTGA GATCGAGCGA GGAGAGCACA CCGGCGCGAA TCGCGCGACT CACCGAGGCT
GCGCAGCGGC GTCGTCCGAA AGTCTCACGA TTGATCGATA GCATAGGAGA CCGCTACAGT
AAGGCGATAT TGGCCATCAC CTTTATTACC ATGGCCGCGG CGCCGATGGT GCTCGGGATT
CCATTTTTGG GTCGCGGCGG TGCCATGTAT CGCAGCTTTG CGTTTTTATC CTCCGCAGCG
CCGTGTGCAT TGTTGATGTC GCCGCTCGTG TACGTGGCGG CCATCGGGGC CATGGCTCGG
CGAGGTGTGC TCATTCGAGG CGGCTTGACT CTCGACGCTT TGGCCGAAGT CGGCGCGGTG
GCGCTCGATA AGACGGGAAC CATCACGACG GGGCAAATGA GCTGCACGAA TATCACACAA
TTTGAAGACG GTGCGCAACA CGACACTGCT CCGAGCGCGT CAGTCAAGGC TCTGGCGTAC
GCGCTGAGCC TCGAACGCGG TTCGTCCCAC CCGATTGCCG CCGCGGTGAC GCAAGCGGCG
CGGGGGATCA TTTTGCCAGA CGTCGGTCCC GTGACGGATT ACAAAGTCAT CGCGGGGAGT
GGTGTGGAAG GCACGATCGA CGGCAAGCGT GCGCGATTCG GTAGCTCCGA GTTTGCGCTC
GAGCTGTGTA ACACTGGCGC TGCGGAATGC TCCGCCGAGG TCATCGCGCA AGAGGGCGAA
GTGCTCTCTG TGCTCGCGAT TGAGGGCGAA AGCCCGGCGC TGTTTAGGTT TAGTGATACG
CTTAATTTGC AGGCGCCCGA TGCCATCGAG TCCCTGCGTA CTGGCAAGTG CCGACGGAGA
TGGTGGGAGG TGGCGAGCGA CTCGACGGGT ATGGAGTTGG CCATGCTCAC GGGCGACAAC
AAGACGAGCG CCATAGCCAT GGCTGAGGAG ATCAAGTTGA AACCGGAAGA CGTACACGCC
GGATTGACTC CGTCTCAAAA GCTTGCACTG GTTGAATCAA TGCGAGAGCG CGTGAAATCC
AAGCAATATC CTCGCGTGGC CATGGTTGGC GATGGTATCA ACGATGCCCC AGCGCTCGCC
GCCGCGGATG TCGGCGTCGC CATCGCGTCG ACGCCGAGCG ATGCCGCCGC GAGTGCGGCG
GATGTACTGT TGCTCACTAA AGACGAAGGA GGCATCTCTC AATTACCAGA GCTGTTTTCC
ATCGCCGAGC GCACGCGACG CACTTTACGA CAAAACATCG CACTCGCCGT GGTATCAATC
TTGGGGTCAG CTATTCCCGC TCTCTTCGGC GCGTTTCCGC TATGGTTGGC GGTATTGCTG
CACGAAGGCG CGACCCTCAT GGTGGCGATG AACTCAGTGC GTTTGCTTGT CACGTTCGGG
CGACAGCCGT TGTCCAAGAG TACTACCGTG GCCCTCACGA CGTTCACCGT GTTTTGTTGC
TTGGGCGCAG CGTACTCGGT GTGCAGCGAA GCGATTGCCA TTTGGGTCAA ACATTTGCAC
GTCGCACACT GGATGAGCGT AATCACGGCG TTTAAGTCTG CATGGGCTGG TCTATTAGCC
GGTTGCTTGC ACACGCTCAC GGGGCCAGAC CACTTAGCGG CACTCACGCC ACTGACAGTG
GGACCGAGCA GAGCGCAAAA CGCGTTGATG GGCGCGCTTT GGGGGCTCGG GCATAACACG
GGTCAAATTT TATTTGGATG TATTTTCATC GCTTTGAGGG ATAAATTACC GCTCAACTTG
GAAGTTATCG GTCAGTTTGG ACAAGGAATC GTCGGTTTGA CGCTCATTAT TATTGGCGCT
ATTGGCTTTT GGGAAAGCAT GGGCGGTCAC TCGCACTCAC ATTCACACTC ACACTCACAC
TCGCATTCGC ACTCGCATGG GAGCGATGTG CCCGCGAAGC GCGATAGCAG CTTCATCTCA
TGGACGTATA TTACTGGCAC CATCCATGGA TTACAACCGG ATTCATTGTT TCTGCTTTTA
CCTGCCCTGG CGCTCCCTCG CGTCGAGGCG ATTTCTTTTT TGGCGACGTT CTTCATCGGA
ACCATTATCG CCATGGGGAC GTACACGTAC TGCATTGGTG CGGGTACGGC AGCGTTGGAG
AAGAATAATC CCAAGTTTGT GAGCTATATC GCTCGTGGAT CGAGCGCCGT CGCGCTCGCC
TTCGGTGTAT TATTTGTCAT CAGCGCCGTA TTTGGTCTTG ATTTGATTTT TTAG
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| Protein sequence | MSADEDEFVS QAGMMAATSS GEFAPRGRTE RALDAMFNAT GLHAVADFLR GNAAVAVVSW
ALFLVAGAAH VATHVGGGGL VETTMAANVS RVCTILVYVL AGTPEFVDVT YELAVGNVNI
HVLTTLAVFG TVLLGCAMEG ALLLVLFALA HFVEDRLTLH ARGDLKALWG TVPTTADVVQ
LLADGTPDLT TLREMPAADV DVGTMIFVKA GQQVPLDGMV VHGSALVSIQ HITGEALPVM
KRYGDEIPAG AMNTDGVLVV KSLRSSEEST PARIARLTEA AQRRRPKVSR LIDSIGDRYS
KAILAITFIT MAAAPMVLGI PFLGRGGAMY RSFAFLSSAA PCALLMSPLV YVAAIGAMAR
RGVLIRGGLT LDALAEVGAV ALDKTGTITT GQMSCTNITQ FEDGAQHDTA PSASVKALAY
ALSLERGSSH PIAAAVTQAA RGIILPDVGP VTDYKVIAGS GVEGTIDGKR ARFGSSEFAL
ELCNTGAAEC SAEVIAQEGE VLSVLAIEGE SPALFRFSDT LNLQAPDAIE SLRTGKCRRR
WWEVASDSTG MELAMLTGDN KTSAIAMAEE IKLKPEDVHA GLTPSQKLAL VESMRERVKS
KQYPRVAMVG DGINDAPALA AADVGVAIAS TPSDAAASAA DVLLLTKDEG GISQLPELFS
IAERTRRTLR QNIALAVVSI LGSAIPALFG AFPLWLAVLL HEGATLMVAM NSVRLLVTFG
RQPLSKSTTV ALTTFTVFCC LGAAYSVCSE AIAIWVKHLH VAHWMSVITA FKSAWAGLLA
GCLHTLTGPD HLAALTPLTV GPSRAQNALM GALWGLGHNT GQILFGCIFI ALRDKLPLNL
EVIGQFGQGI VGLTLIIIGA IGFWESMGGH SHSHSHSHSH SHSHSHGSDV PAKRDSSFIS
WTYITGTIHG LQPDSLFLLL PALALPRVEA ISFLATFFIG TIIAMGTYTY CIGAGTAALE
KNNPKFVSYI ARGSSAVALA FGVLFVISAV FGLDLIF
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