| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_27344 |
|---|
| Symbol | |
|---|
| ID | 5005537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009368 |
|---|
| Strand | + |
|---|
| Start bp | 104745 |
|---|
| End bp | 105278 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640420958 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421208 |
|---|
| Protein GI | 145353840 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.00843923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0707375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCGC TGTTGTCGCC GTTCGGAGCG TTTGTCGTCG CCGCGATCGT GAGTGTGGCG
AATCCAACGT TCATGACGAG CGGGCGAGAG GCGATACTGA TGAAACTTTA CGAAAGGCAG
AGCGGCGGCG AAACCTCGGC GTACGTCAAG GACGGCGTTT TGTATCGCAT GGACGCGTCG
GGGAGCATGA CGGCCAACGC GAAGGATGGG ATCATGGTGG ATAAGAATGG GGGGATATGG
GTGATCGTTC CGCAGAAGGA TGATGTGACG TTGATCAAGC AGAAGTATTA CATGGGACAG
ATCGAAGACG TGCCGACGCT GCCGAAGAAT CCGTCGGCGG CGGAGCAGAA AAAGTACGAC
GAATTCATGG CCAAGTTGTT CGATTTCGAA AAGCTTCCGA ACGTTAAGAA GGTGTACGAT
GGACCCTATC CCGTGCCCGT TCGTAAAGAG ACGGAGAAAT TCTTCCGCGA AGGGTTGCCC
GCGAGCGTGA TGGATGAAAT CGAAGGTGTG GGCGCGTTGT TTGAACAACG ATGA
|
|---|
| Protein sequence | MRALLSPFGA FVVAAIVSVA NPTFMTSGRE AILMKLYERQ SGGETSAYVK DGVLYRMDAS
GSMTANAKDG IMVDKNGGIW VIVPQKDDVT LIKQKYYMGQ IEDVPTLPKN PSAAEQKKYD
EFMAKLFDFE KLPNVKKVYD GPYPVPVRKE TEKFFREGLP ASVMDEIEGV GALFEQR
|
|---|
| |