| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_25549 |
|---|
| Symbol | |
|---|
| ID | 5005479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009368 |
|---|
| Strand | - |
|---|
| Start bp | 564788 |
|---|
| End bp | 566483 |
|---|
| Gene Length | 1696 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | 640420900 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421504 |
|---|
| Protein GI | 145354463 |
|---|
| COG category | [A] RNA processing and modification
[D] Cell cycle control, cell division, chromosome partitioning
[K] Transcription |
|---|
| COG ID | [COG5147] Myb superfamily proteins, including transcription factors and mRNA splicing factors |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.51719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.155521 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CCCGCGATCG AGGCGCGTCG CATTTCCGAC GCCCACGCGT CAACGCACCG CGAGAATCGC
GCGCACGCCG GGAAACGCGC GAAGAGCGCA CCGAGGAGGC GCAATTAACG CTCGCCGTTG
ACTGCGAAAC GTCGCCGGCG AATCGAATCG AGCTCGCGTT CGGCGCGCGC GACGATCGCG
GCGGGTCGAC GCGGTCGGCG ACGACGCGCG CGCGTGATCG AGGCGCGGTC TCAGCGTCGA
CGGGACGCGT CGAAGCGTCG CGTCGATCGC ACGTTCGAGG GTGACGGCTG ACTGGCAAGA
TTCGGGGCGT CATCGAACGC GCGATGGCTC GCACGCGAGG CGAGGAGCCG GCGGAGAAGT
CGGCGACGAT CGCGTTGGCT GATATCGCCG CCGCGACTGA GACGATTAAG AAGGCTCACA
TGAAGAAGGA ATCGAAGAAA CGTAAGGCGG AACTCGACGT CAGGGCGCCG TTGAGCAAGC
GACAGCTGGA CGACGACGCG GCGTACGCGG CGTTGATGCA CGACAAGTCA AAGGATGCAG
ACTTGCCGGT GGCGCAGGCT TCGGAGAAGG AATTGCAAAC TGTTTCTGAT AGTAGCGAGT
GGGACGTCAA GTTTCCGGGG CAGAGATTCG GGCAGTGGAG CACGCTCGAG GTGGAACAGA
TGAAGCGCTC GCTCGAGAAA TGGGCCAACG AGCACGGGCT CGCAGAAGAT TTCATGAATG
GCAACTATGA GTTCTTGTTC AACCGTCGTC AAAAGCAAGG AGGTAAAGGT GCACACTTAC
CGCTATCTGA GCGACGCGCG TTTATCGAAG TCGCTCGCGA GACGCCGACA AGAAACGCCA
AGCAAATTTA CGGCTGGATT TTGAGAAACA TGGACAAAAA GTCGAAGTCG GGGAAGTGGC
AGAAGGAGGA GACGGAAGCT TTGCTCGAGC AATACACGAA ACTGGGCCCG AAATGGTCCA
AGATCGCGGA AATAGTCGGC AGGCCGGCGT CGGCGTGCCG TGACAAGTGG CGTCTCGCCA
AGGGAGGTGA ACACAAAAAG TCGGGGCACT GGAGCCAGGA AGAAACCGAC AAGTTGTGTG
AGCTCGTGAA GGAACACTTC CGCCAGCGAG GCGCGGAAGC TGGATGCGGG CCGGGAACGG
GCAACGAACA CCTTTCACTT CGCGACAATA TCAACTGGGT CACCATCTCT GCCAAAATGG
GCACTCGAAA CGAGCAGGCT TGTTTGCAAC GATGGTATCA AATCTCGCCT CCAATGACGA
GTACGGGCGA GTGGGATGTC GAACAAGACT ACGAGATGTT GAATAACGTC ATCAAGTACA
GATCGATGAC TGCCGAAGCT GTGCCATGGG CGTCGACTGT TCGGGGCCGT GATTTGTCTC
GAATCATGCG ACGGTGGAAA TTGCTTTCGT CCAAAATCTC TGGACACGTC GACATGGCAT
TCCGCGAACT CGTGCTCCAA GTTTGCAAGA GTAAGGACTA CAAAGACCTC GTTATCAAGG
CGCAAGCTTT GGTCAAGTCT TCCTCGAGCG CGTGACTACG AGCTTAAGAT GCGATGATGT
TTTCACCTAC CCACTGTACC ATCCACATCA CCTGCCCACT GTACCATCCA TATTCATGTC
ATAATTTTTT CCGTTTCAGC GTGAGTTTTG AAACAGGCTC GTCATACAAT TTAGATAATT
CCTTAGTCAT GCAAGA
|
|---|
| Protein sequence | MARTRGEEPA EKSATIALAD IAAATETIKK AHMKKESKKR KAELDVRAPL SKRQLDDDAA
YAALMHDKSK DADLPVAQAS EKELQTVSDS SEWDVKFPGQ RFGQWSTLEV EQMKRSLEKW
ANEHGLAEDF MNGNYEFLFN RRQKQGGKGA HLPLSERRAF IEVARETPTR NAKQIYGWIL
RNMDKKSKSG KWQKEETEAL LEQYTKLGPK WSKIAEIVGR PASACRDKWR LAKGGEHKKS
GHWSQEETDK LCELVKEHFR QRGAEAGCGP GTGNEHLSLR DNINWVTISA KMGTRNEQAC
LQRWYQISPP MTSTGEWDVE QDYEMLNNVI KYRSMTAEAV PWASTVRGRD LSRIMRRWKL
LSSKISGHVD MAFRELVLQV CKSKDYKDLV IKAQALVKSS SSA
|
|---|
| |