| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_25476 |
|---|
| Symbol | |
|---|
| ID | 5005487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009368 |
|---|
| Strand | - |
|---|
| Start bp | 149511 |
|---|
| End bp | 151665 |
|---|
| Gene Length | 2155 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | |
|---|
| GC content | 65% |
|---|
| IMG OID | 640420908 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421400 |
|---|
| Protein GI | 145354243 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.102353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00487339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | CGCGCGGGAT CGCGTCTCGA CGGGTTCCCG AGAGCTCGCG TCGCGAAGCC TCGAGCGCGA
GGCCGACACA CGGTGCGTCT TTAGTCTTCA CATCGATCGC GCGCGCGCGC GCGGAAACGC
GCGGTCGCGC GCGCGGAGAG ACGCGTCGCA CGATGTGTCG GAACCGCGTG GCGCGCGCGT
GACATTCGCG CGAAAATGTC GACGCGCGCG CGTCCGCGAC GACGCGCGCG CGTCGCGCGC
GCCGGGAATG GGCGCGCGAT ATATTCGTCG ATCGCGCGCG CGCGTCGGGG GGCGAGACGC
GCGAGGCACG ACGACGCGAG CGGGCGACGC GTCGTCGTCT CGGATCCCGT GACGCGGATG
CGCCGCGTTC CCCCGCGGCG CGCGGCGGAG GGCGCGCGCC GGCGCGGCGT CGCGCGCGGA
CGGCGCGGAC GCGCGCGAAG AGGCGCGAGA TCGAGAGTTG GGTTTCGAAC GCGTCGATCG
CGCGCGTCGC GCGCGCGCGC GGGCGGTCGC CGGCGCGGGC GCGGGCGAGG ACGGCGCGGT
CGTTAACGAG GGGTACTAAA CCGTGGGGAC GCCGGGACGC GCCGGGACGC GCCGGGACGC
GGCGCGGCGA CGGCGCGGGA TCGAATCGGA CGTCGAAAAC GGGGGCGAAC GCGATCGCGA
TGATCGCGAA TCGCGGCGAG AGGTTCGGGC GCGCGGTGAG AATGGGTGAC TGACGAAGCG
ACGCGACGCG CGCGACGGGA CAGGTTTCGC CGAGACGGCG ATTCGCGCGA GCGAACTCGC
GAAGGCGACG GACTCGAGGG TTGAACGCGG GGAGATCTCG TCGCGTAGAC GACGTCATGG
TGGCGAGTAC GAAGGCGCGT CGCGGCGCGC GCGGTGATCA CGAGGTGATT GATCGCAAGG
AGGCGCACGC CGAGGCGACG ACGAAGGGGG GACACATGAG CACGAGAAAT CGGGGCGACG
CGCACGTCGA CGAGGATGGG AAGAGAACGC CGGATAATGT GCTGGTAAAC ACGCTCGCTA
AGGGACGGGC GGTGCCGACG TCGTCCAGCG ATACCGATGA GGAGGCGATG ATGGTGAAGA
GAGCGAAGAA GAATTGGAGC GCCGACGCGG TGGCGCTCGG GTACGAAATC GGCACCATCA
AACACAGCGC GTACGTGTTG CTCGCGGAGA GCGGCACGCG CGGGATGACC GTGGCATCGA
TCGTGGGGAC GGCGCAGAGA TTATCGATGT ACAGTTGGGG GACGTGTAAG ACGCCGAACA
ACTCCGTCAC CGCGGCGCTG AGTCAGGATG AAACCTTTGT CCGAATCGCG CCGTCGACGT
ACTGCTTGCG TTCGCAGCTG CGCGGCAGCG GCAACGACTT GCCAGCCCCG CGCACGTCGA
GTGGATCCCA CGACAGTGGC ACCACTGGAA TTGGACACGG TAACGGCAGA AATGGCGACA
GCGGTGCGTG TCAGTCGGGC CAAGGGCACG GCAGACAACA GAAGAAGCAT CGCGCGCCGC
AGTACGCGCC GCGCGCGCGG TCGCCCATGC ACTTCGTCGT CGACGAACCT TACAACAGTG
GCTACGATGA CGACGAGGCG GTGAACATAC ACGTCGAAGA CTCTTTCGAT CGGTTCGATC
GCATGGGAGA TGCGAAGAGA ACGGCCGACG CGCTCGCGCA AGAGAGTTAC CGACGACGCA
TGGACGTCTA CGGCCACAAC GTGGGCGACG AGTTCGGAAC ATCTTTCCAT TTTCCCCCTA
CGGAAATTGT TCGTCCCGAT CACTCCCCCG AAGCCGCCGT CGCCGGCAGT TGTTTGTTGT
ACTATCCCAC TGCGCGCGCC GCCGAGCGCA CGGGGATCCC GGCGACGCCG AAAGAGCCCA
CCGAGGCCAC GCACAGAGCG GTGTCGTGGA AGGATGAGGC CAAGCGTTTA CACGGAACGC
GACACAAGTC GAAGCCTTCG AGTTCTACGA CGCTCCCTAC TTGGGTGCTC GAGCAGTACT
TGGAGGAGCA TAATCAGATA CTCTGTGACG ATCTCTAACA AGGGCGACCA CACTCGCTTT
CAAGGAAGAG ATCGTCGTCG AGTTAATATT TTGTCTCGTC CAACCAACGT GTACAACAAA
ACAAAACAAT CCCAGCAACT GTAGTTTACT TACCAGGATG ATGTTGTAAC TCCAC
|
|---|
| Protein sequence | MVASTKARRG ARGDHEVIDR KEAHAEATTK GGHMSTRNRG DAHVDEDGKR TPDNVLVNTL
AKGRAVPTSS SDTDEEAMMV KRAKKNWSAD AVALGYEIGT IKHSAYVLLA ESGTRGMTVA
SIVGTAQRLS MYSWGTCKTP NNSVTAALSQ DETFVRIAPS TYCLRSQLRG SGNDLPAPRT
SSGSHDSGTT GIGHGNGRNG DSGACQSGQG HGRQQKKHRA PQYAPRARSP MHFVVDEPYN
SGYDDDEAVN IHVEDSFDRF DRMGDAKRTA DALAQESYRR RMDVYGHNVG DEFGTSFHFP
PTEIVRPDHS PEAAVAGSCL LYYPTARAAE RTGTSRSLRV LRRSLLGCSS STWRSIIRYS
VTISNKGDHT RFQGRDRRRV NILSRPTNVY NKTKQSQQL
|
|---|
| |