| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_18161 |
|---|
| Symbol | |
|---|
| ID | 5005288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009368 |
|---|
| Strand | + |
|---|
| Start bp | 541781 |
|---|
| End bp | 542548 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 640420709 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421311 |
|---|
| Protein GI | 145354055 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0058077 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.125778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAATC TCCCGAGTTT ACTGCCGAAA AAGTTCAAGA TTGGAATGAT TTCGCTCTGC
GACGACGGCG TCGAAGCCAT CTGCGCGCAG TCGATGGCGA ACAAGCAGGC GTACGCCGAT
TATCACGGAT ACGATTTGAT AGTGGATGAA GAAATTATCG ATAGAAACCG GCCGACGAGC
TGGAGTAAGC TACTGGCGAT GCGCAAGTAT TTGCCCGATT ACGACTTTAT GCTCTACGTC
GACGTCGACA CGATCATCAT GAATCCGGAG AAGAAGTTGG AAGACATCGT GGATTACAAT
TACGATCAGA TGCTAGCGGC GGATAAAAAC GGTTTAAATT GTGGGGTTTG GATGGTGCGC
AACACGCCGT GGATGCTGTG GTTCATCGAC GAGATGTGGG CGCAAGATCA ACTCGTCGCG
CCGAAGACGT GGAACATGCT CTTTAAATAC GAGCAACGCG CTTTTCATTA TCTCTATCAG
TCAAAGATTT GGCGCAGCAA GGTAAAAGGT GATGCATACC CCAAAGCTAA CACCGTTCGC
GCGAGGACAA AGGTTTTGAA CGCGTGCGTG TTCAATTCTC AGCCTTCGTT TTACGTCAAA
GGCGATTTGC TCGTCCACCT CGCCGGTCTG AAGGGCACGG TAAAGTGCAT GTGGTTTAGA
TATTACTACA AACAGTCTCT GAACACGATT CGGGCGGTGG GTGCGGTGTC ATCAGACGCC
GATCTCCCTC CGCCGTCGAT TTGGACGTGT TTAACGAGGC AAACGTGA
|
|---|
| Protein sequence | MTNLPSLLPK KFKIGMISLC DDGVEAICAQ SMANKQAYAD YHGYDLIVDE EIIDRNRPTS
WSKLLAMRKY LPDYDFMLYV DVDTIIMNPE KKLEDIVDYN YDQMLAADKN GLNCGVWMVR
NTPWMLWFID EMWAQDQLVA PKTWNMLFKY EQRAFHYLYQ SKIWRSKVKG DAYPKANTVR
ARTKVLNACV FNSQPSFYVK GDLLVHLAGL KGTVKCMWFR YYYKQSLNTI RAVGAVSSDA
DLPPPSIWTC LTRQT
|
|---|
| |