| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_17984 |
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| Symbol | |
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| ID | 5005529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009368 |
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| Strand | - |
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| Start bp | 71820 |
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| End bp | 73478 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | |
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| GC content | 63% |
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| IMG OID | 640420950 |
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| Product | predicted protein |
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| Protein accession | XP_001421379 |
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| Protein GI | 145354199 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5044] RAB proteins geranylgeranyltransferase component A (RAB escort protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.247444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0415301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGA ACGACGCGCG CGGCGACGAG TTCGACCTGC CGAAGTCGTG CGACGTCCTG
ATCGTCGGCA CCGCGCTCCC GCAGGCGGTG CTCGCCGCGG CGATCGCGCG GCGCGGCGAG
CGCGTCGTTT GCCTGGACGC CGGGACATCT TACGGCGACG CGTTCGGTGC GTTCGCGGCG
ACGACGCCCG CGCGCGGGCT GTTCGCGAGC GATGCGATCG ACGGAGAGAA CGCGTGGGAG
ACGTTCGGGA CGTGCGTGGA CGCGAAGACG GGACGCGTGG ACGACACGGC GTCGAGGCGG
TTGCGGCGGT CGGCGAACGA GGACGCGAAC GCGCCGGCGA GAGGGTACTC GATCGATTTA
AACGCCCCGC GATTGGCGCT CGGCGCGGAT GGGTTCGTGG AAACGCTCGT GCGATCGGGA
GCGCACAAGT ATTTGGAGTT CAAGGCGATC GAGCGGACGT TCGTGTACGC GGACGGCGTC
GCTCGAGCGG TGGCGAGTAA TCGAAGCGAC GTGTTCAAGG ATCGAGGGTT GTCCGGGGGC
GAGAAACGGG CGTTGATGCG GTTTTTGAAG GCGGTACACG TGGAGGCGAT GCGGGACGCG
ACCGGACGGC GGCGAAGTGG GAAGAGCGGG GAAGAGACAA ACGTCGCCGT GGGCGCGCCG
GGAAGCGAGT GGGGCGGCGA CGAATTCCAA ACGACGAAAG ACGACGACGA CGCCGAGGGA
TTGCGCGTGG AAAACGGCGA AACGATGGAT GCGTTTTTGA CGCGGCACGG GCTCAGCGCG
AGTCTTCGTG CGGCCGTGAC TTACGCGCTG GCGTTACAAA CGAGAGCGGA TTGCGCCGCG
GCGACGGCGC TCGAAGATTT AAAAGTGTAC ATTTTGAGCG TGGCCAAGTA CGGTCCGCAG
ACTGGAGCGT GCTTAATTCC TGTGTACGGT GCCGGTGATA TCCCGCAAGC GTTCTGTCGC
GTTGGTGCCG TGGATGGTGC GACGTACGTC TTGCGTCAAG GCGTTCGCGA GTTGGACGCC
TCGACGACGA TTTCGGCGGC GATTTCGACG GGCGGTCAAG AGATTCGTGC GAGAAAATTC
ATCGTACCAG CGCCTGAGCG TTCCAGTGGA CCGCTTTTGG TGCACGCTGT GTGTATTTTA
GACGCGCCGT TGGTCGCGGA GTACGGCCAG ATGCTCGTCG TGTTCCCGCC TTTGAGCGCC
GCCGATGCGC AAACCGCCGT CATCCGCGCG CTTCAAGTGG GCTCGCACAC GGGGTGTTGT
CCAGAGGGCA AGTACCTTTT GTATCTCTCC ACTGTCGTGG ATGATGTAAA CGTCGATCCC
TATGCAGGCT TAAATGCCGC GCTAGACGTG CTAGTACGCC GAGGCGAAGT ATCCTCTACG
GCGAGCGCAT TCGGCGCCGA CGTCGAAAAA CCCGAAGTTC TTTGGGGCAC GATGTACAAG
AGACGGTGCG GTCATCTCGA CGACATCGAA TGCTCGTCAT CGAACGTGGC ATATTGTCCT
GGACCAGACG AACTTGCGAC GTTCGAGGGC GCTTTACGCG CCGCTGAGCG TGCGTACAAA
GCGCTCTTCG GCGACGACCA GGAGATGTTT CCGCTCACAG AAGGTGAGCC GAAGGAGACG
ACGGGCGACG ACGACATGGA CGCGATGCTC GAAGACTGA
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| Protein sequence | MPANDARGDE FDLPKSCDVL IVGTALPQAV LAAAIARRGE RVVCLDAGTS YGDAFGAFAA
TTPARGLFAS DAIDGENAWE TFGTCVDAKT GRVDDTASRR LRRSANEDAN APARGYSIDL
NAPRLALGAD GFVETLVRSG AHKYLEFKAI ERTFVYADGV ARAVASNRSD VFKDRGLSGG
EKRALMRFLK AVHVEAMRDA TGRRRSGKSG EETNVAVGAP GSEWGGDEFQ TTKDDDDAEG
LRVENGETMD AFLTRHGLSA SLRAAVTYAL ALQTRADCAA ATALEDLKVY ILSVAKYGPQ
TGACLIPVYG AGDIPQAFCR VGAVDGATYV LRQGVRELDA STTISAAIST GGQEIRARKF
IVPAPERSSG PLLVHAVCIL DAPLVAEYGQ MLVVFPPLSA ADAQTAVIRA LQVGSHTGCC
PEGKYLLYLS TVVDDVNVDP YAGLNAALDV LVRRGEVSST ASAFGADVEK PEVLWGTMYK
RRCGHLDDIE CSSSNVAYCP GPDELATFEG ALRAAERAYK ALFGDDQEMF PLTEGEPKET
TGDDDMDAML ED
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