Gene OSTLU_88895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_88895 
Symbol 
ID5005102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009367 
Strand
Start bp70181 
End bp71047 
Gene Length867 bp 
Protein Length288 aa 
Translation table 
GC content62% 
IMG OID640420523 
Productpredicted protein 
Protein accessionXP_001421041 
Protein GI145353484 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0380911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00603627 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGGGCGA GGGACGATGG GGGACTGACG AGGACGCGCG CGGAGCGACG AACGCAGGAC 
GTGGCGCCGG CGCTGGAGAG CGATTGGCGG GAATTTCGGG CGCAGTTGTT GGCGCGCGAG
CGCGCGGTGA CGCCGGAGGA AGAGCGGGCG CGCGCGGCGG CGGTGTCGGA GGAAAATTTG
AAGGTGCTGG AGACGCAAAA TCCGAGGCTG GCGGCGTCGG CGCCGTGGGC GCACGTCATC
GGCGCGCCGG AGAAGGGGTG CTTGCTCGTC GCGGCCGATC ACGAGTTTAG GATGTCGCAG
CAGTATTTTC ATCAAGCGGT CATCTTGGTG CTCGAACATC ACGAGAATGG GTCGATGGGG
GTTATTTTGA ACCGGCCGAC GCAGTACGAC ATGGGGTACG TGAGCGGGGA AGCAAACGGG
CCGTTCGCGA AGAACGCGTT GTATTTTGGC GGTGACGTCG GCGATGGCAC CGTGAGTTTT
TTGCACGGCA GAGAGGACGT GAAGGGGAGC GTCGAGGTCT TACCCGGGGT GTATCTCGGC
GGCTACGACA GCGCGTGTGA ATTGGTGCAG CAAGACGGCT CGACGTGTCA CGCCGACGAA
TTTAAATTTT TCGCCCGATA TTGCGGCTGG GCGCCCGGGC AGCTAGAGAG CGAGTGCGAG
CGTGGGGTGT GGTTTCCAGT CGCCGCAGCC AAGGAGTTGT CGCTGAAACA AGTGATTCAG
CTTCCTAAGC CGCTCTGGCG CGAGATTTCA GAATTGTGCG GCGGAGAACT CGAAGAAATG
GCGCGAAAAG CGTACCAAAC GTACGAGGCC GAGCAAACCT TTTCGCTCGA TAACTTGGAC
GCCGACGAGC GCGCGACGGA TGAATAA
 
Protein sequence
VGARDDGGLT RTRAERRTQD VAPALESDWR EFRAQLLARE RAVTPEEERA RAAAVSEENL 
KVLETQNPRL AASAPWAHVI GAPEKGCLLV AADHEFRMSQ QYFHQAVILV LEHHENGSMG
VILNRPTQYD MGYVSGEANG PFAKNALYFG GDVGDGTVSF LHGREDVKGS VEVLPGVYLG
GYDSACELVQ QDGSTCHADE FKFFARYCGW APGQLESECE RGVWFPVAAA KELSLKQVIQ
LPKPLWREIS ELCGGELEEM ARKAYQTYEA EQTFSLDNLD ADERATDE