Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_88895 |
Symbol | |
ID | 5005102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009367 |
Strand | - |
Start bp | 70181 |
End bp | 71047 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | |
GC content | 62% |
IMG OID | 640420523 |
Product | predicted protein |
Protein accession | XP_001421041 |
Protein GI | 145353484 |
COG category | [K] Transcription |
COG ID | [COG1678] Putative transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.0380911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00603627 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGGGGCGA GGGACGATGG GGGACTGACG AGGACGCGCG CGGAGCGACG AACGCAGGAC GTGGCGCCGG CGCTGGAGAG CGATTGGCGG GAATTTCGGG CGCAGTTGTT GGCGCGCGAG CGCGCGGTGA CGCCGGAGGA AGAGCGGGCG CGCGCGGCGG CGGTGTCGGA GGAAAATTTG AAGGTGCTGG AGACGCAAAA TCCGAGGCTG GCGGCGTCGG CGCCGTGGGC GCACGTCATC GGCGCGCCGG AGAAGGGGTG CTTGCTCGTC GCGGCCGATC ACGAGTTTAG GATGTCGCAG CAGTATTTTC ATCAAGCGGT CATCTTGGTG CTCGAACATC ACGAGAATGG GTCGATGGGG GTTATTTTGA ACCGGCCGAC GCAGTACGAC ATGGGGTACG TGAGCGGGGA AGCAAACGGG CCGTTCGCGA AGAACGCGTT GTATTTTGGC GGTGACGTCG GCGATGGCAC CGTGAGTTTT TTGCACGGCA GAGAGGACGT GAAGGGGAGC GTCGAGGTCT TACCCGGGGT GTATCTCGGC GGCTACGACA GCGCGTGTGA ATTGGTGCAG CAAGACGGCT CGACGTGTCA CGCCGACGAA TTTAAATTTT TCGCCCGATA TTGCGGCTGG GCGCCCGGGC AGCTAGAGAG CGAGTGCGAG CGTGGGGTGT GGTTTCCAGT CGCCGCAGCC AAGGAGTTGT CGCTGAAACA AGTGATTCAG CTTCCTAAGC CGCTCTGGCG CGAGATTTCA GAATTGTGCG GCGGAGAACT CGAAGAAATG GCGCGAAAAG CGTACCAAAC GTACGAGGCC GAGCAAACCT TTTCGCTCGA TAACTTGGAC GCCGACGAGC GCGCGACGGA TGAATAA
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Protein sequence | VGARDDGGLT RTRAERRTQD VAPALESDWR EFRAQLLARE RAVTPEEERA RAAAVSEENL KVLETQNPRL AASAPWAHVI GAPEKGCLLV AADHEFRMSQ QYFHQAVILV LEHHENGSMG VILNRPTQYD MGYVSGEANG PFAKNALYFG GDVGDGTVSF LHGREDVKGS VEVLPGVYLG GYDSACELVQ QDGSTCHADE FKFFARYCGW APGQLESECE RGVWFPVAAA KELSLKQVIQ LPKPLWREIS ELCGGELEEM ARKAYQTYEA EQTFSLDNLD ADERATDE
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