Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_7923 |
Symbol | |
ID | 5004993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009367 |
Strand | + |
Start bp | 387133 |
End bp | 387681 |
Gene Length | 549 bp |
Protein Length | 183 aa |
Translation table | |
GC content | 57% |
IMG OID | 640420414 |
Product | predicted protein |
Protein accession | XP_001420989 |
Protein GI | 145353373 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 72 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00469197 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GAAAAGGCGG TGCCGTACAC CGTCTTCGTC AAGGATGTGC CGGCGAGCGT GAGCGAACGC GAATTAGCGG ATGTTTTCGC CTCGTGCGGC CGCATCATAG ACTGTCGCAT GTGCGGTGAT GCGAACACAC ACAAGTTTAG CTACGCCTTT GTGGCGTTTG AGTGCGCCGA GGCGGTGGAT CGGGCGTTAT TGTTGGACAA GACGCCGCTC CACGGGAAAA ACATCATGGT GAAGAAGAGC GACACCGCGG TGATCCCAGT GAACCCGTTA CTGCTACCGC AGAATGAACG AGAGGTTGAA TCGTGCGCGA GGACAATTTA CGTCGCAAAC GTCGACAAGA CCGTGGACTC GCACGCGTTG AAGTTACTTT TCGAGGACCG CGCCGGCCCC GTCAACCGCT TGCATTTGCA AGTGAAGAAC AACGCCGTGG CGAATGTAGC CTTCGTAGAG TTCGTCGACC TCGAAAGCGT GGGAACCGCG CTGCATTTGA CGGGTGAACA GCTTGGAAAC CGCATGATTC GCGTGAGTGC GTCAAAGACG CCGCTCCGT
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Protein sequence | EKAVPYTVFV KDVPASVSER ELADVFASCG RIIDCRMCGD ANTHKFSYAF VAFECAEAVD RALLLDKTPL HGKNIMVKKS DTAVIPVNPL LLPQNEREVE SCARTIYVAN VDKTVDSHAL KLLFEDRAGP VNRLHLQVKN NAVANVAFVE FVDLESVGTA LHLTGEQLGN RMIRVSASKT PLR
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