Gene OSTLU_6409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_6409 
Symbol 
ID5005190 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009367 
Strand
Start bp487 
End bp1578 
Gene Length1092 bp 
Protein Length334 aa 
Translation table 
GC content61% 
IMG OID640420611 
Productpredicted protein 
Protein accessionXP_001420878 
Protein GI145353130 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5533] Ubiquitin C-terminal hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ACGACGCGCG CCCCGGTCGG TCTGCGCGGC AGCCTCAACA TGGGGAACAC GTGCTTCCTC 
TCGAGCATAT TGCAGACGCT CGTCTCGACG GCACCGGTGG TGGAATATTT CTTGCGCGAA
AACCACGCGC GGCGCGCGGG GGGATGCGAG ATAGACGATT GCGTGGCGTG CGCGTTCGAC
GAGTACGTGA GCAAGGCGTA CGACGACGCG CGGGTGGCGA CGTCGAGCGC GCCTTCGACG
GCTTCGACGG CGCTCGTGGC GGGCGAGTTG TTGTACGCGT GGTGGGTGAA CGAACCATCG
ATGGCGAAGG AGCAGCAACA GGACGCGCAC GAATTTTTTC TCAGCTTTTT ATCCGTGGCG
CACGCGAACG TGTTGGGGAG GTCGATACGA CCACGCAAGA AACGCGCCGT GGGTCTCGCG
GCGCTGCTTT CGCTGGAAGC CGCGTTCGGC GACGACGATG AGGACGAATA CGAGCGATCG
CAGAACGAAG CCGCGAAGGA GGACGCGGCG ACGTGTGAAT GCGTCTTTCA CACCGCATTC
GCGGGCGTAT TGCGATCAGA TATCGCGTGT GCGTCGTGCG GCGCTTCGAC GACGACGCGC
GAGGCGACGA CGGGCGTTTC GCTCGACGTG CCTCCGGCGA CGAAATCGTC GCGAGTGAGC
CTGATGGAGT GCTTGAGCAA TTTCACCGCC ATGGAGACGA TCGAAAACAC GTCGCGTCGA
GTGTGCTCGG CGTGCGCGGT CGTCAGCGAA TCGCACGGCA AGCAGACCCG CTTTGAACGC
GTTCCGAAAA TCTTAAATTT TCACTTCAAG CGCTTCGAGG GCGACTTCAA GTCGATGCGC
AAGAACGACA TTCACGTCGA CTTCCCGTTC GACCTGGACA TGTCGCCTTA TCACGCGCAT
GATTGCAAGG AAACCAACCA CGACGCCGCG TACGAGTTGT ACAGCGTCGT CCAACACAGC
GGAGTCCTCG AAGGTGGACA TTACGTGGCG TACGTGAGGC GAGACGGTGC CTGGTTCCTG
TGTGACGACG CTGTCGTGCG CGAGGCCGAT GAGAACGAGG TGAAATCATC GCAGGCGTTC
ATGTTGTTCT AT
 
Protein sequence
TTRAPVGLRG SLNMGNTCFL SSILQTLVST APVVEYFLRE NHARRAGGCE IDDCVACAFD 
EYVSKAYDDA RVATSSAPST ASTALVAGEL LYAWWVNEPS MAKEQQQDAH EFFLSFLSVA
HANVLGRSIR PRKKRAEDAA TCECVFHTAF AGVLRSDIAC ASCGASTTTR EATTGVSLDV
PPATKSSRVS LMECLSNFTA METIENTSRR VCSACAVVSE SHGKQTRFER VPKILNFHFK
RFEGDFKSMR KNDIHVDFPF DLDMSPYHAH DCKETNHDAA YELYSVVQHS GVLEGGHYVA
YVRRDGAWFL CDDAVVREAD ENEVKSSQAF MLFY