Gene OSTLU_5458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_5458 
Symbol 
ID5005127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009367 
Strand
Start bp160790 
End bp161692 
Gene Length903 bp 
Protein Length301 aa 
Translation table 
GC content64% 
IMG OID640420548 
Productpredicted protein 
Protein accessionXP_001421070 
Protein GI145353544 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1184] Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0354619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000724978 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GAAATCATCG CGAGCGTGCG CGCGATCGGT GGATCGCTGG CGGTGCTGAA GCGGGAACAC 
TTGCTGGTCG GGAACGTGGC GCGGCGCGTG CTGCGAGTGA TACGGGACGA GGGGGCGACG
AGCGAGAGGG GCGACGGCGG CGGCGGCGGC GAGAGCGGCG GCGGCGGCGG CGGCGCGGCG
ACGAAGAAAT TGAAAAAGGA TGTCATCGAT ACCGCACACG AGGTGATCGA GGAAATGGAG
ACGGTGTCGA CGAATATTGC GAGCCAAAGC TCGGATTTTG TGACGAATGG ATGCGTGGTG
ATGACGATGG GGTCGAACGC GAGCGCGGGG ACCGGGTTGG CGGAGGCGTT TTTGAGAGAC
GCGAATAAGA AACGGTCCGC GAGCGAGGGA GGGGGTGGAT TTAGCGTCGT CGTCGCGGAG
AGCGCGCCGA GATACGACGG ACACGCGATG GCGAAGAGTT TAGCCGAGCG TGGGGTGCGG
GACGTGAGCT TGATTTGCGA TAGCGCGGTG TACGCGACGA TGCCGAGCGT CAAGCTGTGC
GTGTTGAGCG CGCGGGGCGT GCTCGCCGAT GGCAGCGCGC TCGTCGATAG CGGGGCGTAT
AACATAGCTC TTGCCGCGAA AGCGCACTCC GTACCCGTGC TTATGCTCGC CGGTTCGTAC
GCAATCTCAC CGAAGACGCA AAAAGAAGCC GGGTTCGACC GCGTCTACGG CTTCGGGTCG
CCGTCGACGG CACTGGGTTA CGGCGAGCGC GGTGCCGATC CGGACGCCGT CGTCATAAAC
CCGTCGTTCG AATTCGTACC CGCGGAACTG ATCTCGGTGT TCGTCACCGA TCACGGCGCG
CATTGCCCGG GATTCATCAA CGTCTTACTG TCAGAGATGT ACTCCCCGCT CGATTCCGCG
CTC
 
Protein sequence
EIIASVRAIG GSLAVLKREH LLVGNVARRV LRVIRDEGAT SERGDGGGGG ESGGGGGGAA 
TKKLKKDVID TAHEVIEEME TVSTNIASQS SDFVTNGCVV MTMGSNASAG TGLAEAFLRD
ANKKRSASEG GGGFSVVVAE SAPRYDGHAM AKSLAERGVR DVSLICDSAV YATMPSVKLC
VLSARGVLAD GSALVDSGAY NIALAAKAHS VPVLMLAGSY AISPKTQKEA GFDRVYGFGS
PSTALGYGER GADPDAVVIN PSFEFVPAEL ISVFVTDHGA HCPGFINVLL SEMYSPLDSA
L