Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_5165 |
Symbol | |
ID | 5004977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009367 |
Strand | + |
Start bp | 343476 |
End bp | 344123 |
Gene Length | 648 bp |
Protein Length | 216 aa |
Translation table | |
GC content | 62% |
IMG OID | 640420398 |
Product | predicted protein |
Protein accession | XP_001420979 |
Protein GI | 145353351 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0398587 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTCCCGTACG GCGATGGATT CGCGTTCGCG AGGGCGACGT GCGAGACGGA GACGATGGTG GCGCTCGCGA CGGCGATGGT CGGGGAAGAG CGACGCATGC GGCTGGAAAA CGTTTTGGAG CATAGAAGTT TTTCGTTGCT GCCGATTCTA GAGGGCGTCT ACGACGTCGG CAATATCTTG GCGGTGTGTC GGACGACGGA GGCGCTGGGG ATCGGGTGCG CGTCGATCGT GAGCTCGAAG GGGCTGTCGT TCAAGGCGAG CGGGAGGACG TCGGGAGGGG CGCTGAAGTG GCAACACGTG GAGCAGTTTG AGACGTCGGA ACGCGCGCTC AGAGTCGCGA AGGCGAAAGG ATACCGCGTT CTTACGACTG AGTTTGACGG CGCGCAGCCG CTGTCGCATT ACGATTGGAC CGTGCCCACG GCGGTGGTGT TTGGGAACGA GCGCGAGGGG GTTTCGGACG AGGCGCGAGC GCTGCGGGAT GGCGCCGTGT ACATTCCGAT GTTTGGCTTC ACCGAGTCTT TGAACATTTC CGTCGCCGCC GCGCTCGTGA TGTCGCACGC CGTGACGGAC CGGATCAACC GCCGAGGGTT TCACGGCGAT TTGACTGAGG AAGAAAAACG TATTTTGCGC GGCGTGTACA TGTCTAGG
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Protein sequence | FPYGDGFAFA RATCETETMV ALATAMVGEE RRMRLENVLE HRSFSLLPIL EGVYDVGNIL AVCRTTEALG IGCASIVSSK GLSFKASGRT SGGALKWQHV EQFETSERAL RVAKAKGYRV LTTEFDGAQP LSHYDWTVPT AVVFGNEREG VSDEARALRD GAVYIPMFGF TESLNISVAA ALVMSHAVTD RINRRGFHGD LTEEEKRILR GVYMSR
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