| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_41856 |
|---|
| Symbol | |
|---|
| ID | 5005136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009367 |
|---|
| Strand | - |
|---|
| Start bp | 192132 |
|---|
| End bp | 192991 |
|---|
| Gene Length | 860 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | |
|---|
| GC content | 63% |
|---|
| IMG OID | 640420557 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421080 |
|---|
| Protein GI | 145353564 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.00446099 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00310862 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCGC CGCCGCAGGG GCAAGTGCCG ACGTTCAAGC TGATCCTCGT CGGCGACGGC
GGGACGGGTG CGCGACGCGA CGCGACGCGA GCGCGGATGA GGGCCGAACG CGATCGAACG
ACGCGAATCC GAATCTGCGC ATCGGAAACG GAAAACGAGG GCGACGGGAC GCGCGGGACG
CGGCGGGGAG AAGACGAGGG CGACGGGAGA CGCGGACGTG GGTGACTGAC GACGCGACGC
GACGCGCGGG ACGCGCGAGG ACAGGGAAGA CGACGTTCGT GAAGCGACAC TTGACGGGGG
AGTTTGAGAA GAAGTATTTG CCGACGGTGG GCGTGAGCGT GCACCCGCTG GATTTCCACA
CGAACTGCGG GCCGATTCGA TTCGATTGCT GGGACACCGC GGGGCAGGAA AAGTTTGGCG
GCCTGCGCGA TGGGTATTAC ATCCACGGGC AGTGCGCGAT CATCATGTTC GACGTGACGT
CGAGGACGAC GTATAAAAAC GTGCCGACGT GGCACCGCGA CATCACGCGC GTGTGCGAGG
ACATTCCCAT CGTGTTGTGC GGTAACAAGG TTGACGTGCG CAACCGTCAG GTGCGCGCGA
AATCGATCAC GTTCCACCGT AAGAAGAACT TGCAGTACTA CGAGTTGTCG GCGAAGTCCA
ACTACAACTT TGAAAAGCCG TTCTTGTACC TCGCTCGCAA GTTGAGCGGG AACGCGGCGT
TGCAGTTCAC CGAATCCCCG GCGTTGGCGC CGCCGACCGT CCAAGTGGAC TTGGCCGAGG
TTGCCGCGTA CGAAAAGGAG CTCGCCGATG CGGCGGCGCA GCCGTTGCCG GATGAGGATG
ACGAGTTGCT CGACGCGTAA
|
|---|
| Protein sequence | MSAPPQGQVP TFKLILVGDG GTGKTTFVKR HLTGEFEKKY LPTVGVSVHP LDFHTNCGPI
RFDCWDTAGQ EKFGGLRDGY YIHGQCAIIM FDVTSRTTYK NVPTWHRDIT RVCEDIPIVL
CGNKVDVRNR QVRAKSITFH RKKNLQYYEL SAKSNYNFEK PFLYLARKLS GNAALQFTES
PALAPPTVQV DLAEVAAYEK ELADAAAQPL PDEDDELLDA
|
|---|
| |