| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_41686 |
|---|
| Symbol | |
|---|
| ID | 5005106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009367 |
|---|
| Strand | - |
|---|
| Start bp | 82894 |
|---|
| End bp | 84840 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 640420527 |
|---|
| Product | VIC family transporter: inwardly rectifying potassium ion channel |
|---|
| Protein accession | XP_001421044 |
|---|
| Protein GI | 145353490 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.0173475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000449346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATTT GTTTCGACAT CATCTTCATA GCCGACATCG CAATCAACTT TTATCGTCCA
ATTGAGAAGT ATGGCAAATT GATTTGGGAC AAGCACGCGA TTGCGATGAA ATATCTTGGA
GGATGGTTCG TCATTGACTT GCTCGCGTCG CTACCGATTG ATCTCATGTT TGCCGGTGCC
ACCACTCCAG GCACGGTGGC GGCGAGAGTA CTGGCTGCGT TGGGCATGCT TCGCCTGCTT
CGATTGTATC GCATCCGACG CATGATGAGC GAGCTCGAAG GCAACCCTAA TCTGCCGTAC
TTGGGGTTCG TAGCGCTCAA ATTTGCACTG TTGATCGCGT TGGCGAGTCA TTGGAGTGCA
TGCTTTTTGT ACTACCTCGC TCGTTGGCAA AAGTTTGATG AAAACACTTG GGTGTACGCG
TACGATCCGG ATCTTCCTAG CCGTACGTTT AGCGACAAAT ACACCACTTC ACTGTACTGG
GCGACCGTAA CGCTCACCAC CGTGGGGTAC GGCGACATAT CTCCCGTGAG TAACCTCGAG
CGAGCGTTTT CCATGATTAT CATGATTTTG AACATGGGCG TCACGGCGTA TATTTTAGGT
AACGTCACGC AAATCGTCAC CAAGGACGAT TCGACAATCA TGGACTTTCG CGATCACATC
GCGTCCCTTC AACGTTTCAT GCGACGGAAC GATATTCCAA GAGCCGTTAG AGAGAAGATC
AACGCACATA TGCAGCTCGA GTACGATATG CGTTGTCGAG ACGACGAAGC GGTGCTGAAT
TTTTGTCCGC CGACGATTCA ATCCGAGCTG AGACACGCAA TCTATCAACA CTACATTAAT
CGATGCGGGA TATTCTCCAA TGCGTCGGCG GTATTTATTC AATACTTTTT GGAGTGTATA
ACAGTGGAGT ACTATCATCC CGGAACGCTG CTCACGTCCA AGGGCTTGGA CGCGACGGCG
ATGTATTACG TGTGCCTCGG CAAGGTGGAC ATCGTATCTG AAAAATACGT GCGCGAACCA
ACGCTGAGTA ACAAGATTAA CACGATCTTG CCCGGTGAAT GGTTAAACAT CGCAGCCGTG
CTTTGTCGTC GAACTTGCTT CCACACTAGC ATCGTGACGT CTACGTGCAA AGTTTTAGTC
GTCTCCTCGA GCAAGCTCGA CAACGTCCTC GCACGTTTTC CTCGAGATGT CAAACAAATT
TTGCGTACGT TGAAAGAGAA GTATTTGCTT GAGCTGAGTG CGATGGGACC CCGCGCGGAA
GATGGTTTCG AACTTTACAC CAACTTTGTG CAAGCGCTCG ACCAAAAGTC TACTGATCTG
TATGAAAGTG AATTGCACGA GCTCAACGTC GCGGCGGTGA CGGGCGATAC GACGGCGCTC
GACATGGCGC TTGCGGATGA GCCACGGAAT GCGCATCTCA CAGATAGTGC TGGACGCACA
CTCCTCATGG TAGCTGTCGA AAACAAGCAG AATAACGTCG TGAAGCTACT CCTCAAGTGG
GGCGCAGATC CCAATGCCAT GAGCAAGGCT GGGTATTCGC CGCTATCGCG CGCCGTCTCG
GTAGGAAGTC TTCCATTGGT GAAGATTCTT GTCACCGCAG GCGGTCTCTA TCACTCCCCT
GACGACCAAA CCGTGCTTCA CTCCGCAATC TCACAGGATC AAGTGCAGAG AATAAAACTT
TTGATCGTCG CCGGGGTGAA TTTGTCAAGC CAAGACTATC AAGGGAGCAC GGCGCTCCAC
GTCGCGGCGA GGCTGGGAAT GCCGACCATC TTGAGGATTT TATTCGACGC TGGGATTGAA
GATAACTTGT TGGATAAAGA CGGAAGATCA GCCGAGGATG TCGCTAACAT CAGTGGGAAC
CCTGGTTGCG CGAAAGTGAT CCGAGAAAGG AAGCAACTCC GCTCGACGAG GTCCGGTGTC
CCATCGCACA CTCCGATGTC GCCGTGA
|
|---|
| Protein sequence | MEICFDIIFI ADIAINFYRP IEKYGKLIWD KHAIAMKYLG GWFVIDLLAS LPIDLMFAGA
TTPGTVAARV LAALGMLRLL RLYRIRRMMS ELEGNPNLPY LGFVALKFAL LIALASHWSA
CFLYYLARWQ KFDENTWVYA YDPDLPSRTF SDKYTTSLYW ATVTLTTVGY GDISPVSNLE
RAFSMIIMIL NMGVTAYILG NVTQIVTKDD STIMDFRDHI ASLQRFMRRN DIPRAVREKI
NAHMQLEYDM RCRDDEAVLN FCPPTIQSEL RHAIYQHYIN RCGIFSNASA VFIQYFLECI
TVEYYHPGTL LTSKGLDATA MYYVCLGKVD IVSEKYVREP TLSNKINTIL PGEWLNIAAV
LCRRTCFHTS IVTSTCKVLV VSSSKLDNVL ARFPRDVKQI LRTLKEKYLL ELSAMGPRAE
DGFELYTNFV QALDQKSTDL YESELHELNV AAVTGDTTAL DMALADEPRN AHLTDSAGRT
LLMVAVENKQ NNVVKLLLKW GADPNAMSKA GYSPLSRAVS VGSLPLVKIL VTAGGLYHSP
DDQTVLHSAI SQDQVQRIKL LIVAGVNLSS QDYQGSTALH VAARLGMPTI LRILFDAGIE
DNLLDKDGRS AEDVANISGN PGCAKVIRER KQLRSTRSGV PSHTPMSP
|
|---|
| |