Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_27255 |
Symbol | |
ID | 5004931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009367 |
Strand | + |
Start bp | 473127 |
End bp | 475010 |
Gene Length | 1884 bp |
Protein Length | 622 aa |
Translation table | |
GC content | 59% |
IMG OID | 640420352 |
Product | predicted protein |
Protein accession | XP_001421009 |
Protein GI | 145353414 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5347] GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0830887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGAGG CGATGGAGGC GCTGTCGAGC GAACGCGAGC GGTTGGCGAA TTTCACGAGA AACGCGCTGG CGAGCGAAAA CGTGCGAAGA GCGACGGAAA AGGACGTCGG GGAGCTGCGC GAACGTCGTA AAGCGGTGGA TGCGGCGAAG AAGGAGTACG ATGGGGTGCG ACAGCGATAT ATGAAGACGA CGGGAGGGGA GGAAGAGTTG CGCGCGGCGA AACTGTCGTT TGAGCGCGCG CGACGGGATT TGCTCGTAGC GCTGCAACGA GTGAATGTGG CGAAGCACAC GCGCACGAAA CGGTGCGCCG TAGACTTAAT CGACGCGCAG TTGGATTACT TTCGTCGGGG GGTGGAAATA TTGACTCGCC TCTCGCCCAC GCTGGATATT TTGAGAAAGG ACGTCGCGGC GGCGGAGGCC GAGGGCGCGG ACTTAGAGGC GGCGTTGAAC GAGGAAATGG AAAAGCTGAT GGCGCGGTGC GATGACGAAG CGCAATCGAC ATCGGACGCA CTGTCGATGG TAAGTGACCG CGCGAGAGAG ATGAGCGCGC AGATGGCGTC GTCCGCCGCG GGATACGGGT CCTCTCAAAA CGAAGCGTTG ATGCAAGGAT ATTTATTGAA GCGATCGAGC GGGAAAATTC AAGATTGGAA GCGGCGATTC TTCGTTTTGG ATGCGCGCGG ATCGCTGACG TACACGAAAT CGCTTTCGTC CAATCCGAGG AAAGCGCTCG GCGGGAAGTT GTTATCGCTC GGGTCGATGC GAAATAAGTC GTCAAACGCG CCTTCGACGC AGACGACTGG CGGAGGAGAG GTACGCGAGA CGGTATCTTT GCTCACGGCG ACGATTAAAC CCGACTTGGA CGACGACTCG AACGCGCGTT TCGCGTTTCG CATCGTTTCT CCCGAAAAGA CGTATTATTT ACGCTGCGAA AGCAACGCGG AGCGAAGCAA ATGGATGGAA GCTATCACGA CCGCGATCGC GAGTTTATTA AATTCGAGCG TGAACGAAAC AATCCTGGCA GAGCACGAAG CGAGCGTGAA CAAATACGGG AGCAAGCATT CGCGGACGAT GTCGTCGATC TCGAGCGTCT CCGCGTACGA CGGTCCGCCA CCCTTGACGG TGCTCGGCGC CGTGCCCGGC AACGGATTCT GCGCCGATTG CGACATGCCA GAGCCGGATT GGGCGAGTCT TAACCTCGGT ATCATGCTTT GCTTGCAATG CAGCGGCGTT CATAGGCAGT TGGGCGTGCA GGTGAGCAAA GTTCGGAGCG CAACGCTCGA CGTGCGCGCG TGGGAGCCAA GCGTGTTGGA ATTTTTCTCG CGCTGGGGCA ACGCCCAATC GAACGCGCGT TGGGAGTACG AAAAAGCCGA AGTCGAGGCG AAAAAACCCA ACAAGAATTC GTCGCTCGAA TCTCGAAAGG CTTTCATACT CTCAAAGTAC GTCGCCAAGG CGTTTTGCCG TCGCGAGGCG CAACCGACCG AGTCGCAGCT CTTGACGGCG ATCAACTCCA ACTCGCTACC AGCCGTCATG GATTTACTCC TCAAAGGCCC GCACATCAAG ATGCACTGGG TCATGCTCAC CGCCGCTTGC GACTGCGGTG ATGCTTCCAT CGCCATCCTC GAAGCTCTGC TGCACCACAA CGTCGACGTG AACGCTCGAG AGAATCCGTA CACCGAGGAC ACCGCGCTCC ACTACGCCGC ACGAAGAGGC CGAGACGCCT TCGCCAAGGT TCTACTCCGT CGCGGTGCCG ACCCGCGCGT CCTCAACGGG CGCGGTCAGA CCGCTTTCGA CGTCGCCGTG GACGTTCACG GCGCGATTCG CGACGAGGAT TTACTCATCA TGCTCAGCGC CGCGCAAGAC GACGACTAGC CCTTGTAACG CTCG
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Protein sequence | MREAMEALSS ERERLANFTR NALASENVRR ATEKDVGELR ERRKAVDAAK KEYDGVRQRY MKTTGGEEEL RAAKLSFERA RRDLLVALQR VNVAKHTRTK RCAVDLIDAQ LDYFRRGVEI LTRLSPTLDI LRKDVAAAEA EGADLEAALN EEMEKLMARC DDEAQSTSDA LSMVSDRARE MSAQMASSAA GYGSSQNEAL MQGYLLKRSS GKIQDWKRRF FVLDARGSLT YTKSLSSNPR KALGGKLLSL GSMRNKSSNA PSTQTTGGGE VRETVSLLTA TIKPDLDDDS NARFAFRIVS PEKTYYLRCE SNAERSKWME AITTAIASLL NSSVNETILA EHEASVNKYG SKHSRTMSSI SSVSAYDGPP PLTVLGAVPG NGFCADCDMP EPDWASLNLG IMLCLQCSGV HRQLGVQVSK VRSATLDVRA WEPSVLEFFS RWGNAQSNAR WEYEKAEVEA KKPNKNSSLE SRKAFILSKY VAKAFCRREA QPTESQLLTA INSNSLPAVM DLLLKGPHIK MHWVMLTAAC DCGDASIAIL EALLHHNVDV NARENPYTED TALHYAARRG RDAFAKVLLR RGADPRVLNG RGQTAFDVAV DVHGAIRDED LLIMLSAAQD DD
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