Gene OSTLU_27248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_27248 
Symbol 
ID5004928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009367 
Strand
Start bp458516 
End bp461070 
Gene Length2555 bp 
Protein Length680 aa 
Translation table 
GC content58% 
IMG OID640420349 
Productpredicted protein 
Protein accessionXP_001421006 
Protein GI145353408 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.2735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CCGCGCGCAT GCGATCGCGC CGCGCGACGG ACTCGTCGTC GGACGCGCGC GCGCGCGGAC 
GCGCGCGACC GACGGCGCGC GCGCGCGCGC GCGTCGGATG CTGCTTCGGC GCGCGGGACG
CGGCGTCGGA CGACGAGGAC GCGCGACGCG ACGCGAGCGA TGGGTCGACG AGCGCGAGCG
ACGCCGACGC GGGTCGGACG TCGGACGGGA CGCGCGCGCG CGCGACGTCG ACGGCGTCGG
CGTCGACGTC GGCGTCGGCG TCGGCGGGCG AGGCGAAGGC GAGGCGGCAG AGCGTCGACT
ACGCGCTGCG CGCGAGTCAG GGATCGCTCG CGTCGGGGGA AGAGGCGACG GCGAACGCGA
ACGGAGGAGA CGATGAGTTC GTCGGCGACG CGGGATCGGC GGAGCTGACG TATTTCGTGA
AGCTGAACGC GAAGATGCTG GCGAAGCGAC GGAGAGCGAC GAAGAGCGAA TTGGAACCGC
TGTGCGAGGC GCTGTCGCAG ACGTTTACGT TTTCTGAGCT CGATGCGAAC GTCAGGCGAC
GCGTGGCGAG CGAAATGTTC TTCATCAACG TGCCGGAGGG GACGATTTTG ATGGAGGAGG
ACGAACCGGG CGACGCGTTG TATCTCATCG CCGGAGGCGA ATTCGACGTG CTGCAAAATC
GGCTCGGCGC CGATATCAGC GTCCTCACGC GCACGAAAGG CGATATCATC GGCGAGTTAG
CTTTACTTTA TAGCGTGCCG CGCTCGGCGA CGGTGCGGGC GAAGACGCGG TCGCAGGTTT
GGGTGTGCAC GCAACAAGTC TTCAAGAGGG AGGTCAAGCA CAGCGTCGAG GCGACGACGC
TCGCGAAGAA TTTATTCCTC GAACAAGTTC CCGTGCTCAG CGCTTTACCG ATCGACACGC
GGAAGTCGTT CGCGGATGCC TTGGAGACGG TCTCGTTCGA CCCGTACACG GACGTTATTA
CCGAAGGCGA AGCGTGCGAC GGTAAATTTT ACCTCGTCAA TTCGGGGCGA GCGCAAGTTT
CCAAGCTCGA CCCGGACACG GGTGAACCGC GCACGGTGAA TCACTTGTTT CGACACGACT
TTTTTGGTGC TTCCGAGATC ATTCGCGGTG ATGAACCGCG AGAGTACACC GTGCGATGCG
TGGAAACTCC TCTGGTGTGT TACGTCGTCA ATCGAGACGT GTTCCTCGAG AAGCTGTCAT
CCGTGCGCGA AGATTTACTT CGAGAAAAGT CTCGAGAAGT CATTCGTAAT CGCATGCGGC
AGCTCAAGGG TGAAAAGTCG TGGCGCTCCG CCCGAATTCG CCTGTTAGGT AGCGCGCGCG
TGGGAGGAAA GAAGGTGAAC ATTAGCATGT ACGGCTCAGT AAACCCGAGG TCGTTCGCCA
CGGACGTCAA TCGGGAGTTG GGGTCGATCG ATTTAGTGGA GAAGGAAATG CTCGGTGGAG
GCACTGGTGG GCACGTGTAT CGCGTTATTC AAGAAGGTAT GAATGTGTCG TCACCGCGCG
CCTTCGCGCT CAAGCGCGTG CGTAAGCGTG CCGTGATGGA GAGTCCGTCG CACATTTTCT
GCGAAAAGGA AGTCACGAGC GAAATCAGCC ACTTTTCGTT GATGTGTCAG CACGCCAGTT
TCCAAGACAG GAATCATCTG TACATGCTTT TCGACATCAT GGATGGGTGT GACTTGATGG
ACATGCTTGC GAGCGCGGTG CAAGTGAAGT TAATTCCGAC ACAAATCGAT GGTGAGATTC
GCCACGTGCC CACGCAGATT GGCATCAGCG AAGACACGGC GCGATACTAC ACCGCCATGG
TTATTCTCGC GTTCGAGTAT CTGCACGGCA ACCAAATCAT CTATCGCGAC TTGAAGCCAG
AGAATGTATT GCTTGCGCTC AACGGCAAAT GTAAGCTCGG AGATTTTGGC TACGCGAAGA
AACTTGACGT CGGCGAACGC GCGTTTACGT TTTGCGGCAC CCCTGGGTAC GTGGCGCCAG
AAATTGTGCT GTCCACGGGA TACGGCTACG CCGTCGATTG GTGGGCGCTG GGTGTTTTGA
CGTACGTCAC AATAACGGGA CAACAGCCGT TCACGATATC AAAGGATCCG TCCCAAAAAG
ACGATCCATT GAAAGTGATG CGGCGAATCG TGGACATGTC GTACGAGGTG CAATACCCCA
CGTACGCCAC CGACGAGGCG TGCAATTTTA TTTCTCAGCT CTTGCAGCGA AACTCGGCGA
AAAGGCTCGG AAACATGCAA GGCGGGGTCA GTCAGATTAA GAGACACCCT TGGTTCGCCA
AGTTTGACTG GGCGCTGCTA GAGAGTGGCG AGTACACGCC CAAGCCGCTG ACGCTTTCGC
GGCAGTTTTT AGAAATTCAG CGCGAACGTC TTATCGAGAT CGAACGGGAA TCGTTGCTCG
CAACTGAAAT GGATTCGGCG AGAGGACCGA CGGATGCGTC TATGAATCGT GCGAACGAGA
TTTTCAAGGA TTTTTAAGAG CCATGACAGA AAGTGCTCAC ATCACAGCGT TACAGCGTTT
TAGCTACATA GGTCAAATTT GTCATTATAC CATAC
 
Protein sequence
MLAKRRRATK SELEPLCEAL SQTFTFSELD ANVRRRVASE MFFINVPEGT ILMEEDEPGD 
ALYLIAGGEF DVLQNRLGAD ISVLTRTKGD IIGELALLYS VPRSATVRAK TRSQVWVCTQ
QVFKREVKHS VEATTLAKNL FLEQVPVLSA LPIDTRKSFA DALETVSFDP YTDVITEGEA
CDGKFYLVNS GRAQVSKLDP DTGEPRTVNH LFRHDFFGAS EIIRGDEPRE YTVRCVETPL
VCYVVNRDVF LEKLSSVRED LLREKSREVI RNRMRQLKGE KSWRSARIRL LGSARVGGKK
VNISMYGSVN PRSFATDVNR ELGSIDLVEK EMLGGGTGGH VYRVIQEGMN VSSPRAFALK
RVRKRAVMES PSHIFCEKEV TSEISHFSLM CQHASFQDRN HLYMLFDIMD GCDLMDMLAS
AVQVKLIPTQ IDGEIRHVPT QIGISEDTAR YYTAMVILAF EYLHGNQIIY RDLKPENVLL
ALNGKCKLGD FGYAKKLDVG ERAFTFCGTP GYVAPEIVLS TGYGYAVDWW ALGVLTYVTI
TGQQPFTISK DPSQKDDPLK VMRRIVDMSY EVQYPTYATD EACNFISQLL QRNSAKRLGN
MQGGVSQIKR HPWFAKFDWA LLESGEYTPK PLTLSRQFLE IQRERLIEIE RESLLATEMD
SARGPTDASM NRANEIFKDF