Gene OSTLU_27128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_27128 
Symbol 
ID5004954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009367 
Strand
Start bp252278 
End bp253312 
Gene Length1035 bp 
Protein Length344 aa 
Translation table 
GC content57% 
IMG OID640420375 
Productpredicted protein 
Protein accessionXP_001420947 
Protein GI145353281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0139269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTCA CCAACGTCGG CGGTTCGTTA ACCACCGCCG TGTGTCTGTC TCTCATCGCC 
TGGTCCGTGC GCGTCTTGCG AAGCGCCAAG CACAGAGATC GAGCGAGACA GCGAACGACG
TCGAGCTCGC AACCGACGGT GAAATTGAAC AAACAGACGT ACGGGGTGCT GAGTGCGAAA
GCGTTTTGGA TGTTGGTTCA AACGAAACCG GTGAAATACT TGCTATTAGA CGTCAGACCG
AAGAGCGAGG ACGGGGGGGC GACGGCGGTG ACGAAGCTGA GCGACAGACT CGCCGTGACG
CACATCTTAC CGGAAGAGTT GGCGAACTTG TTGCGCAATC GTAACACACT GTGGAAGAAG
AGATTTCCAA ACATTCCCGT GCCGAGTTTA AGGACGACGA TGATTTTTGT GAGCACGCAC
GGGCATAGCT CGTCGCACGC CGCGGCGCTC GCGACGAGCC TGGGATTCAC GCGGTGCTCC
ATCGTGGACG GCGGACTCGC CGCGGCGGTA CCTCTAGCAC ACTTCGACGA ACCCGCTGTG
TTTTCATCAG GGAAAGATCG AGCTCTGAGC TTCGACGCGG TGTTACTTCT CCTGGAAACG
GTGAGAGACG ACGGCAATGC GCTGGGACTA GTGATTTTGG ACATTCGAAG GTTTGACGAG
CGCGCGCTTT ACGGAACACT CGAGGGGTCA ACGCACGTCC CGGTGGATCA TCTGCCCAAA
GCAGTGCATA TGAACGATGA AGAGTGGGTG CGGATGTTCC GATTTCACAA GCCGACGTCG
GATAATCTCA TCTTGTTGCA TAGCCGAAGC AGTAGTTCCG CGGCGTGGGC GAAGCAGCTG
CTTTCAGACG CCGGTTTGCA CAACTGCCAT TCTTACGTCG ACGGCGCGTA TGCCGGTCCT
GATGGGACTT TAAGAAGTTA CGAGGCATAC GAAGAGGGTG GTGCACCCCC GGAGCCGGTG
AGTATCGGAC AAAGTGTGAC GTTTAATCGA ACGAGCGCCG AGCGAGAGTT GCTCAACTTG
AGAATTCGTG TGTAG
 
Protein sequence
MHVTNVGGSL TTAVCLSLIA WSVRVLRSAK HRDRARQRTT SSSQPTVKLN KQTYGVLSAK 
AFWMLVQTKP VKYLLLDVRP KSEDGGATAV TKLSDRLAVT HILPEELANL LRNRNTLWKK
RFPNIPVPSL RTTMIFVSTH GHSSSHAAAL ATSLGFTRCS IVDGGLAAAV PLAHFDEPAV
FSSGKDRALS FDAVLLLLET VRDDGNALGL VILDIRRFDE RALYGTLEGS THVPVDHLPK
AVHMNDEEWV RMFRFHKPTS DNLILLHSRS SSSAAWAKQL LSDAGLHNCH SYVDGAYAGP
DGTLRSYEAY EEGGAPPEPV SIGQSVTFNR TSAERELLNL RIRV