| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_27101 |
|---|
| Symbol | |
|---|
| ID | 5005044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009367 |
|---|
| Strand | - |
|---|
| Start bp | 210557 |
|---|
| End bp | 211539 |
|---|
| Gene Length | 983 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | |
|---|
| GC content | 69% |
|---|
| IMG OID | 640420465 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421086 |
|---|
| Protein GI | 145353577 |
|---|
| COG category | [A] RNA processing and modification |
|---|
| COG ID | [COG5183] Protein involved in mRNA turnover and stability |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0000172913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00146832 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | CGCCGCGCGC GTCGGCGATG AGCTCGCCCG TGATTCTCAC CGGGCTCGCC CTGCTCGAGG
CGCACCGACG CGCGAACGAG GCCGAGGCGC GCGCGCGCGC GAGCGCGAGC GAGGCGGAGA
CGAGCTCGAG CGACGACGAG GAGGCGCGCG AGGACGACGA CGACGACGAG AGCGACGCGA
GCGATGCGAG CGCGACGCCG GCGCGCGGTG CGGAAGAGGT AAACGCGCGT CGGATGTCGC
CGAGCGGACG CGCGGCGATG GGACGGCTGT CGAGGAGCGC GAGCGCGAGG GAGCTGGCGA
GCGCGGCGAG CGGGACGGCG AGCGGGACGA CGAGCGGGAC GACGAGCGGG ACGACGGCGA
CGGCGGCGGT GGAGACGTCG CCGAGCGTCG CGTCGGCGAA GAAGGCGTCG GAGGGGACGT
GCAGGTTTTG TTTCACGGGG TCCGAGTGTG GGACGCTGAT CGAGCCGTGC GCGTGCGCGG
GGTCGCAGGC GTACGTGCAC AAGAGGTGCC TACGACGATG GCAGCGCGTG AGTTATCAAA
CGCGCGGCGC GCGCGAGACG CAGTGCAGGG TGTGTCACGC GAATTACACG TACGAATCGA
AAATTTGGAG CAAGGAGGCG CGACGCGGGC CGAGGTTTTG GTTTTCGTTC CGAGCGAGGG
ATCGGTTGAA CGAGTACTCG CGCGCGTGGA TTCAGAGCGC GGCGAACGCG TTGTTACGAC
GAAAGGGCGT ATCCCTGCCG CGGAGCGCGA GCAGCGCGGG AAATCTCGCC TTGCTCGTCG
CCCACAGCGA GGTTCGCATC TGGGCCGGGC GCGAAGAGCG CAGGGAAGGC GTGACGAGCG
GATTACCGAA ACTCTTGCGC GTCGCCTCGT TTCTCGTGCG CGCGGCGAGC TCGTACGCCA
AAGTCAGGCT TCTCCTCGCC CCGAACGCCG CCGTCGCGAC CGCCGCCGCG TCTTCGTGAA
GAATGTTATC ATCAGTGTAA TTA
|
|---|
| Protein sequence | MSPSGRAAMG RLSRSASARE LASAASGTAS GTTSGTTSGT TATAAVETSP SVASAKKASE
GTCRFCFTGS ECGTLIEPCA CAGSQAYVHK RCLRRWQRVS YQTRGARETQ CRVCHANYTY
ESKIWSKEAR RGPRFWFSFR ARDRLNEYSR AWIQSAANAL LRRKGVSLPR SASSAGNLAL
LVAHSEVRIW AGREERREGV TSGLPKLLRV ASFLVRAASS YAKVRLLLAP NAAVATAAAS
S
|
|---|
| |