| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_27098 |
|---|
| Symbol | |
|---|
| ID | 5005042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009367 |
|---|
| Strand | - |
|---|
| Start bp | 206523 |
|---|
| End bp | 208412 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | |
|---|
| GC content | 64% |
|---|
| IMG OID | 640420463 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421084 |
|---|
| Protein GI | 145353573 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.000638286 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00161809 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGAG CGAATCGCGA GCGAGGGGTG TGGGTGGATG TGATTTGGTT CGCGCCGAAC
GCGGCGGCTG TCGGCGATTT TAAACGCGGC GCGGCGTGGA CGACGGGAAT GGTCGCGGCG
TACGGCGTGT TTCGACGCGC GAAGGCGTGC TTCGGGACGT TCGCGCGGTG TCGCGTGGTG
CTGTGCGGCG AGGGGGGGGG GTCGGAGATG GCGCGAGCGG TGGCGGACGC CGCGGGGGCG
TCGATTTCAA ACGTCGGCGA CGACGAGACG GTGGATTTGG GCGAGCGGTG GCGAGGAACG
TTGGCGTTCG CGTCGTCGAG CGGGAAAGAT AGGGTAGAAA TTCACGGGTT ACGCGCGACG
CGTTTGCAGC CGCGAGCGAG CGCGGATGAT GGGGAGGAGG AGACGATGGA TGCGACGGCG
ACGACGAGCT CGGCGCCGAG ACCGCCCGCG CCCGCGCCGC CTAGAGCGAG CGCGTTGCGC
GTGGTGGAAA TTGTGCGCGC GCGCGACATC CCGAGCGTGT ACTTGAGCTC GACGTTATCT
CTGTGCGTGC GCATGGACGA CGTCCCGGAG TCGCGAGACG TGCGCGAGGC GTTGTTTTCG
TCGTGGAGCG CGGCGTTCGC GGACGCGCCG ACGCCAGGCG ACGTCCCGGC GATGGTAGTG
AAGACTCAAT GGATGAGCGG CACGGCGGCG CGGCGTCAGT ACCGCGACGT GTCGAGCGAC
GGACAACTCG ACGCTACGCC GATGCTGCTC TATCCCGTGC GCCGCGGTGC CGATGGGTTA
GAGTTTCATC TTCGTGCGTT CGCGACGGTG CCCGAATTGT TGCGGCGTCT CTCCGCGAGC
GCGGGCGCGA GTGGGTTGAA CAAAGTCAAC GTCGCGATGG ACAACATGAG CACACTCGCA
CGTCAAAACG CATTAGACGA AGCGGATCAC GCGCTCGGTT TACTCAGCGC TCGACAGAGC
GTCAAGCTCA AGGATATCGT GGAAGACGCA GACGTCGTCG AAGACGTGAA CGAAGACGTG
TACAAAGACG CCGAACCGAA TTTGGTACCG CTCGACGAAG CGATCTCGCC CGAGATCGGT
GCCGTGAAGA GCTCGCAAAT CTTTTCCGCC GTCGCTGCGG CGTCGCGTGG GACCAGATCG
AGCGAAGGCG ATGCGTACGC CGCGTATGCG CGGCGATGGG ATCGCGGCGG CGAAGCGACG
CGCGTCGGCA TTCGCGTCGA TCCCGGCGCG ACGAAGGCTA CGAATACCGC CGCCTCGCAC
GCGTACGCGC TACGATTCGA CGATATCGCG GATAGATTGA TGGACGTGAA CGAATCCAGC
GTGTCAAATC CGACGTCTCG TCGTGTTGGC GAACAAGACG CCCTCGTCGA AGGGTTCCTC
ATCGAGACGT TTTCGAAATC AATCGACGTC GCGATGTCGC AATTCGATCA AAACGCCGCG
GCGGCGACCA TTCTACCGAG AATAGGTCGA TCGAACGTCG TCGAAGACGC CGAGGCGCGT
GAGAAGTCGT TCCGTCAGCT CATCAGCGAA ACGGATGAGG ACGCGAGAGC GCAGCGTCGC
GCCGAACGCA AGCGACAGAT CGAAGAACGC AGGGAGAAGA CTTTCTTGGC GCTCGGTATA
CGCAAACCTT CGACGGCGAC GACGACATCG TCCTCGATCA TCGAGCGCGA CGCCATCGCG
CGTCCGCGCG CGGCGGCGGC GGCGCAACAG TCGCAACGTC ACCAGGCGCT CGCGTTCGAC
GCCGTCGCCG CCGACGCGCG AGATCCGCTC AAGGAAAACC ACGTCGCAAA ATCATCGTCT
ATTTCGTGTC CCGCGTGCGC GTGCGCGCTC AACCATCCCG TAGGCGCCGT CGCGCTCAAG
TTTTGTTACG AGTGCGGCGC GAAATTGTAA
|
|---|
| Protein sequence | MERANRERGV WVDVIWFAPN AAAVGDFKRG AAWTTGMVAA YGVFRRAKAC FGTFARCRVV
LCGEGGGSEM ARAVADAAGA SISNVGDDET VDLGERWRGT LAFASSSGKD RVEIHGLRAT
RLQPRASADD GEEETMDATA TTSSAPRPPA PAPPRASALR VVEIVRARDI PSVYLSSTLS
LCVRMDDVPE SRDVREALFS SWSAAFADAP TPGDVPAMVV KTQWMSGTAA RRQYRDVSSD
GQLDATPMLL YPVRRGADGL EFHLRAFATV PELLRRLSAS AGASGLNKVN VAMDNMSTLA
RQNALDEADH ALGLLSARQS VKLKDIVEDA DVVEDVNEDV YKDAEPNLVP LDEAISPEIG
AVKSSQIFSA VAAASRGTRS SEGDAYAAYA RRWDRGGEAT RVGIRVDPGA TKATNTAASH
AYALRFDDIA DRLMDVNESS VSNPTSRRVG EQDALVEGFL IETFSKSIDV AMSQFDQNAA
AATILPRIGR SNVVEDAEAR EKSFRQLISE TDEDARAQRR AERKRQIEER REKTFLALGI
RKPSTATTTS SSIIERDAIA RPRAAAAAQQ SQRHQALAFD AVAADARDPL KENHVAKSSS
ISCPACACAL NHPVGAVALK FCYECGAKL
|
|---|
| |