| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_27060 |
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| Symbol | EF1A1 |
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| ID | 5005121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009367 |
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| Strand | - |
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| Start bp | 143552 |
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| End bp | 145369 |
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| Gene Length | 1818 bp |
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| Protein Length | 467 aa |
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| Translation table | |
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| GC content | 61% |
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| IMG OID | 640420542 |
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| Product | Eukaryotic elongation factor 1 alpha |
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| Protein accession | XP_001421065 |
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| Protein GI | 145353534 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5256] Translation elongation factor EF-1alpha (GTPase) |
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| TIGRFAM ID | [TIGR00483] translation elongation factor EF-1 alpha
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.293222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000941001 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | CACACACACG ACTCCATCGG TACGCCTCGC GCGTCGAAAC GATCGCTTAA AATATCTCCC
GCCCATCCGC GCCCCCCCGC CGTGGTCGCG TCGCGCGCGC GCGCGTCGAG CCCGCGCGAT
GCGCGCCGCC GCGCCGCGCG GGTTCGCGCC GCCTCGACGC ATTCGCGCGT CGTCGTCGCG
CGCGCGCGCG CGACGACGAC GCGGTGACGC GCAAACGACG GCGAAGAATA CATCGCGGCG
CCGTCGCGCG CGGGAGGGAC GGAGACGCGC GCGACGCGTC AACGGGACGG TCGTTTGACC
GCGCCGTCCC GGAGACCATC TTTCGGGTTT GTGGATAACA CCGCCGGGAC GCGACGACGA
CCGAGACGCG GAGACTGACG TTGAAACGCG CGCGCGAACG AACGAACGAT AGAAATGTCT
GAAGGCAAGG AACATCTTTC CATCGTGATC TGCGGTCACG TCGATTCCGG TAAGTCGACG
ACGACCGGTC GCTTGTTATT CGAGCTCGGG GGTATCCCGG AGCGCGAACT CGAAAAGCTT
CGCGCCGAAG CCGATGCGCT CGGTAAGTCT TCTTTCGCGT TCGCGTTCTA CATGGATCGC
CAAAAGGAAG AGCGTGAGCG TGGTGTGACG ATTTCTTGCA CGACCAAGGA ATTCTTCACG
GACAAGTGGC ACTACACCAT CATCGACGCC CCGGGTCACC GCGATTTCAT CAAGAACATG
ATTTCCGGCG CGGCGCAAGC CGATGTGGCG CTTCTCATGG TGCCGGCGGA CGGTAACTTC
ACGGTCGCCA TCCAAAAGGG TAACCACAAG GCTGGTGAAG TCCAAGGCCA AACGCGCCAG
CACGCGCGTC TTCTCAACTT GCTCGGCGTC AAGCAGCTCA TTTGCGGCAT CAACAAGATG
GATTGCGACA TGGCTGGCTA CAAGCAAGAG CGTTACGAAG AAATTCGCAA CGAAATGAAG
AACATGTTGA TCAAGGTCGG CTGGAAGAAG GATTACGTCG AGAAGAGCGT CCCGGTCCTC
CCGATCTCTG GCTGGAACGG CGACAACTTG TTGTCCAAGT CCGCGAAGAT GCCGTGGTGG
AACGGCGTCG ACGTCGAAGA CTACATGGGC GGCGGCAAGA AGTTCCACAT CGACTGCCTC
CTCAACGTCC TCAACGACAT GGTCGACAAG CCGGACCGCA ACACGGAAGC CGCCATGCGC
CTTCCGATTT CCGGTGTCTA CAAGATCAAG GGTGTCGGTG ATGTCCTCGC CGGTCGCGTC
GAGCAAGGTC TCGTCAAGCC GGGTGAAGAC GTCGTCTTCC TCCCGACCCA CACCTCCTCC
AACCCGTGCG GTGGTAAGGT GTTCACCGTC GAAATGCACC ACAAGCGCGT CGAAGCCGCC
GCGCCGGGTG ACAACGTCGG TATGAACATC AAGGGTCTCG ACAAGCTCAA CATGCCGCGC
ACCGGTGACG TGATGATCTA CAAGAAGGAC ACCTCCCTCG CCCCGTGCAA GGAGTTCACC
GCGCAAATCC AAACCTTGGA CATTCCGGGT GAACTCAAGG CGGGCTACAG CCCCATCGGT
TTCGTCCGAT GCGGCCGCTC CGCGTGCAAG TTGACCGCGC TCAACTTCAA GGTTGGCAAG
GAAACCGGCG GTAAGAAGCT CGAGTCCCCG ATGTCGTTGA AGTCCAACGA AGTCGCCGAG
TGCGTCTTCG AGCCGGTCCA CCCGCTCGTC GTCGACTCCT TCAAGAAGTG CGAAGGTCTT
TCCCGCATCG CTTTCTTGGA CGGTAACACC GCCGTCATGT TGGGTAAGAT CACCAAGGTT
GAGTACAAGG CCATCTAA
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| Protein sequence | MSEGKEHLSI VICGHVDSGK STTTGRLLFE LGGIPERELE KLRAEADALG KSSFAFAFYM
DRQKEERERG VTISCTTKEF FTDKWHYTII DAPGHRDFIK NMISGAAQAD VALLMVPADG
NFTVAIQKGN HKAGEVQGQT RQHARLLNLL GVKQLICGIN KMDCDMAGYK QERYEEIRNE
MKNMLIKVGW KKDYVEKSVP VLPISGWNGD NLLSKSAKMP WWNGVDVEDY MGGGKKFHID
CLLNVLNDMV DKPDRNTEAA MRLPISGVYK IKGVGDVLAG RVEQGLVKPG EDVVFLPTHT
SSNPCGGKVF TVEMHHKRVE AAAPGDNVGM NIKGLDKLNM PRTGDVMIYK KDTSLAPCKE
FTAQIQTLDI PGELKAGYSP IGFVRCGRSA CKLTALNFKV GKETGGKKLE SPMSLKSNEV
AECVFEPVHP LVVDSFKKCE GLSRIAFLDG NTAVMLGKIT KVEYKAI
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