Gene OSTLU_27053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_27053 
Symbol 
ID5005119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009367 
Strand
Start bp128543 
End bp128761 
Gene Length219 bp 
Protein Length72 aa 
Translation table 
GC content61% 
IMG OID640420540 
Productpredicted protein 
Protein accessionXP_001421061 
Protein GI145353525 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.0249018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000208851 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAAGA AGCTGCGCTT GCGGCTGAAT GGGAACCGGA ACGTCGTCGG GACGCTGCGA 
GGGTTCGATC AATTCTTAAA CGTCGTGCTC GACGACGCGA CGAACGATAC GACGAGCGAG
AAGACGCCGA TGGGGATGAT TGTCGTGCGA GGGAACTCGG TGGTGAGCAT GGAGGCGCTG
GAACACATCG CGCCGGCGGT GCGAAGGCAA GGGGCTTGA
 
Protein sequence
MDKKLRLRLN GNRNVVGTLR GFDQFLNVVL DDATNDTTSE KTPMGMIVVR GNSVVSMEAL 
EHIAPAVRRQ GA