| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_27024 |
|---|
| Symbol | |
|---|
| ID | 5005075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009367 |
|---|
| Strand | + |
|---|
| Start bp | 85791 |
|---|
| End bp | 87611 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640420496 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420900 |
|---|
| Protein GI | 145353179 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.192605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0010263 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC CGAGCGAGAG CTATAACTGG TGCGTCGCGC GGACGGCGCG CGGACGGCGC
GCGGACGGCG CGCGAGGTCG TCGCGCGGCG CGGTGGGCGC GAACGCGTTC GGAATGTGGG
ACACGCGGCG CGATCGAGAT CGAAAAACGC GACGGTGACG ACGCGCGCGC GCGCGGATGC
GAGATCGCGC GCGCGCGCGC GGTGTGATGC GCGTCGACGC GCGGACTGAC GGCGGGCGAG
GCGCGCGCGC GCAGGTTCTT GATCGTCGTG GCGATCGTGG TGACGGCGCT GGCGCTCGCG
TGCAACGTCT ACGTGCTCGT GCACTTTCAA CACCCGGATG ATCGCAATCA GGCGTGGTTT
CCGAAGATCG TCGTCGTCAC TGGATTGACG CTGTCGGTGT TGTCGATATT GTTGCTGCCG
CTGGACGTGG CGAACAGAGC GGCGTGCGAT GAAGCGATTA TAGAGAGCGC GTGTCGGTAC
ACGCTGCCGA TGGAGGACTT TTGGTACGCG ACGTATTTGA CGATGTTTGC GTACATGTTC
GTCTTGGTGC CGTGGACGTT GTTTTATTAC GAGCAAGATT CCGAGGCGAC GCTCGGAAAG
AAGCTGGTGA GCTCGTCGAT TTGGAGCGTG GCGACGCTGT TTGTTTTGTT GATGGCGATG
TTGCTGGCGT ATTACGTGGG CGGCGAAGCC GAGTTTGAGT TGAAGAGCGT CAAGTCAGGG
ATGGCGTTGA TTGGCAACTC GGCGTTGAAT GGTGCGACGT CATGTATAGC GTTACCTTCA
TCGCCAACGA CGGTGACGAA TTTCGCGACT TACACCGCGA CGATGAGCGG GATGGATTGC
GACGCCTACG GCCCAAACGT CGGAACGGAA ACGTTCACCG TCCGACCGAC GTTTATCGTG
TACATGATCG CCGTGGCGTC CATTATATCC TGGTTCATTT TCTTAGTGTA CGCTGGCGTC
GGCATCGTCG CCCTGCCGGT GGATATGATC AAGGGGTTCA TGAACCGTCC GCAAAAAGTC
ATCCCGAAGA GCGAGTACAT TCGGTGCGCG ACGATTTTAG CTCGTGACGC GCAAGCGATA
CATCAGCAAA TTAAGAACGT TCAGAAGGAG CAGCGCGAAA CTGGACGGAC GAAAAAGACT
AAAAAAGATT TGAAAGAGCT TCAGGTGAAG CTCTCCCAGC TCGAGGATGA CGAAGTGGAG
CTGATGACTG TGTTTCCGCA AGGCGAACAA CGCGAGGCCA CGTGGTTGAT GACTGTGTTA
GCGTACTACA TACAGTGCTT CCTCGGTGGC TTGAGTGTCA TCTTGAGCAC GCTGTGGACG
TTACACATCA TCATCACAGT GCTCGTCAAG CCCGCGGCGC ACCCGTTCCT GAACTCGTTC
TTCATATGGT TGGATAGTGG TTGGTCGCTC CTCGGCACGG CTGCGTTTGC GCTGTTTTGC
TTTTATTTGG TGTTTTGCGT CATCAAGGGT AACACACGGT TGGGTCTTCG ATTCTTTTTC
ATGAAGTTGT ATCCCATGAA ATTAGGTCGC ACGAGCATGA GTTCGTTGCT GTTCAACACA
GGATTGATTA TGTTGGGCTC GATTTCAATC GTGCAATTTT GCGCGCAAGT CTTCAACGTT
TACGCGGCTG AAACGGCGGT GACGGATATC TTCGGCGGCA ACATCGAAAA CCTAAAAGGT
TTAGGATATC TTTTCAAGTA CAACGTGTTC ATATACTCGT TCTTCGCGAT GATTTGTTTG
TCATGCATCA TCATTCCATT TGAAACATGG AAAACGCCGA AACCGAAAAA AACTTGGGAA
AGAGACTCGG GTCGCATCTA G
|
|---|
| Protein sequence | MSAPSESYNW FLIVVAIVVT ALALACNVYV LVHFQHPDDR NQAWFPKIVV VTGLTLSVLS
ILLLPLDVAN RAACDEAIIE SACRYTLPME DFWYATYLTM FAYMFVLVPW TLFYYEQDSE
ATLGKKLVSS SIWSVATLFV LLMAMLLAYY VGGEAEFELK SVKSGMALIG NSALNGATSC
IALPSSPTTV TNFATYTATM SGMDCDAYGP NVGTETFTVR PTFIVYMIAV ASIISWFIFL
VYAGVGIVAL PVDMIKGFMN RPQKVIPKSE YIRCATILAR DAQAIHQQIK NVQKEQRETG
RTKKTKKDLK ELQVKLSQLE DDEVELMTVF PQGEQREATW LMTVLAYYIQ CFLGGLSVIL
STLWTLHIII TVLVKPAAHP FLNSFFIWLD SGWSLLGTAA FALFCFYLVF CVIKGNTRLG
LRFFFMKLYP MKLGRTSMSS LLFNTGLIML GSISIVQFCA QVFNVYAAET AVTDIFGGNI
ENLKGLGYLF KYNVFIYSFF AMICLSCIII PFETWKTPKP KKTWERDSGR I
|
|---|
| |