| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_27007 |
|---|
| Symbol | |
|---|
| ID | 5005068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009367 |
|---|
| Strand | + |
|---|
| Start bp | 51023 |
|---|
| End bp | 53244 |
|---|
| Gene Length | 2222 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640420489 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420891 |
|---|
| Protein GI | 145353158 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0000261622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.260585 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGCGATCGAT CGAGACGGTC GAGTCGTTCG CGCGCGCGAC GGACGCGAAC GCGACGGACG
CGACGGGAAT CGAACGAATC GGCGCGAACG AAGGAAAGGA AAGGAAAGGA AGGATCGAAT
CGAATCGAAT CGAATCGAAT CGAATCGAAT CGCGACGGAA ACGCGACGAA AGGGCGACGA
AAGGTCGACC GCGGCGATGG TGCGAGCGAC GGGGCGCGCG CGCGCGGAAC GCGGGACGCG
GGAGGCGCGC GCGCGACGGC GAGAGTCGAG CGAGGGTGGT TCGCGGGACG AGGACGCGGC
GACGACGACG GCGACGACGA GCGGACGCGA GACGGGCGCG CGCGAGACGG AAACGGCGGC
GCGAACGCGC GAGGGGAATG ACGAAGAGGG ACGGGCGGGC GTCGAGGGCG AGGAGACGGC
GGGACGCGAT GGGGAGGAGG AGGGACGCGG CGGCGACGGA GACGCGAGGG AGGGAGACGC
GCTCACGGGG GAGGAGTTGG ACGTGTTGAA GGCGAACACG ACGGGCACGA AGCACGTTCG
AGGGATGGGG ATGAATGGAC ACGTCATGCT CGAGGCGACG ACGTCGAGCG GTGACGGGAG
GGGCGGAGAT CAGCCGCCGG CAAAGGCGCG GAAAATCGTC GCCGCGCCGA AAGGGTTGGG
ACCGCACGCG ATGAAGAATG TGCCTTCGAG CGTGTTGGAC GAGTCGGAGA GGAAATTGAG
ACGACCGAAG GTGCAAACGC ACGAGGTGTA TGGATTACTG CGGGCGCATT ACGATTTAGG
CGACATCGAC CGCGAATCTT TGAAGGAGCT TCCGTCGTAC GACGATAAGA ATTGGTACTT
TTGCGCGTAC ACGGACGATC CCAAGACGGG CGAGAAGGTC AAGCACGAGT ACGTCGCCAA
GGTACACAAC GGTATGGACT CCTCTGGAGT CAGTCGCGGC GTACTCGCGG CGCAAGAGCG
TATCATAGGG TACCTCGCCG CGCACGGCGT CGAGGTTCCA AACGTCGTCA AGTCGAAACT
CGCGATGTAC ACCACGCCTG GTCCGAACGG GACGGTGAAT CTCGTCTCCG AGGGCACGCC
CGGCGCGAAG CGCGAGTTTT GCACGCGCGT GACGTTTCTC GCCAGCAACC AAGTCGCGCA
CACCATGCGC GTGTTGACGT ATGTGCGAGG CAAAACCATC GTGCAGGTGC CGATGCCGCA
CTCGATCGAC TTTGTGCGAA GGAGCGGCTT ATTCGTCGGA CAAGTGTGCC ACGCGTTGTC
CAAGTGGCCT ACGCCGAAAG AGATGGAAAT CCAGCAGGAT CGGCGCGAAC TGGGAGACGC
CGTTACGCTG CCTTACGTAG AGCAGCACGC GATGTGCTGG AAGGTGCTCA CAAGTCGCTC
GCGCTTGTGG GATCTTCGCT TCTTCATGGA CGTGCAGCAC TTCATGACGG ATCTCATCAT
GCGCGAACTC TTCGAAGACG AAACGCGCAT CATGATGTGC AACACCGTCT TCAACGCCTT
CAAACACTTG GTGCTTCCGG TGGCGGACAA ACTTCGCATC GGCATCTTGC ACAACGACTT
GAACGAGCAA AACATCATCG CGTTGGAATC AGGGCCAGAT CCCGTCAAGT TTCCAGCGAA
TGTAAAGTTT GCTGCGATTG ATTTTGGAGA CGTCGTCGTG TCGTGGCGCG TAAACGAAAT
TGCCGTCGCG TGCGCGTACT GCGCTCTGGA CAAGGAAGAC CCCGTGCACG ACATGTCGAT
GATGCTGGCG GGGATTCAAT CCGTCTATCC GCTCACGCCG CTCGAGATGC GCGTCTTGCC
GTGTCTCATC GCCGCTCGTT TGGTCACGTC GCTCATCATG GGCATGTACT CGTACCATAT
GCAAATTGTG GGTGAACAAA ACGATCACGC GTCTGACGCC GCCGCCGGGC AAGCGAACTC
GAACGCGGAC CCGAGCGGCG AACCAGCCAG CGCGGATACG CCGAGGGGCA ACGTGTACGT
ACTCACGACT CAAAAATCTG CTTGGACTGC GCTGACTCGC ATCTTAACCG TCGGCGCGGA
GACGATGTTC AAGAGATTCA TCATCGATGC CTACTCTGAA GGGTCGAGCG TCGTCGTCCC
GCAAGCGGCT GGGTATCCCG CCTAGACGGT TCGCGCGGAC GCCGCGATCG CGACGTATGA
GGACGACGAG TCGATGATGC GCGCGAAAAA CTAATAAATG ATAACATTTA ATGTGCAACA
GT
|
|---|
| Protein sequence | MNGHVMLEAT TSSGDGRGGD QPPAKARKIV AAPKGLGPHA MKNVPSSVLD ESERKLRRPK
VQTHEVYGLL RAHYDLGDID RESLKELPSY DDKNWYFCAY TDDPKTGEKV KHEYVAKVHN
GMDSSGVSRG VLAAQERIIG YLAAHGVEVP NVVKSKLAMY TTPGPNGTVN LVSEGTPGAK
REFCTRVTFL ASNQVAHTMR VLTYVRGKTI VQVPMPHSID FVRRSGLFVG QVCHALSKWP
TPKEMEIQQD RRELGDAVTL PYVEQHAMCW KVLTSRSRLW DLRFFMDVQH FMTDLIMREL
FEDETRIMMC NTVFNAFKHL VLPVADKLRI GILHNDLNEQ NIIALESGPD PVKFPANVKF
AAIDFGDVVV SWRVNEIAVA CAYCALDKED PVHDMSMMLA GIQSVYPLTP LEMRVLPCLI
AARLVTSLIM GMYSYHMQIV GEQNDHASDA AAGQANSNAD PSGEPASADT PRGNVYVLTT
QKSAWTALTR ILTVGAETMF KRFIIDAYSE GSSVVVPQAA GYPA
|
|---|
| |