| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_25441 |
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| Symbol | PPR3_13 |
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| ID | 5005213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009367 |
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| Strand | - |
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| Start bp | 455138 |
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| End bp | 457413 |
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| Gene Length | 2276 bp |
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| Protein Length | 739 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640420634 |
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| Product | pentatrichopeptide repeat (PPR) protein |
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| Protein accession | XP_001421156 |
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| Protein GI | 145353726 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00756] pentatricopeptide repeat domain (PPR motif) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.224466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.223836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA CGCCGAATTG CGCGCCGAAT ATTCGTTCGT ACAACGGCGT CATATCCGCG
GCGACGCGCA AAAAGCACTT CCCGGGCGCG ATGTGGGCTT GGGAAGAGAT CGAGACGGCG
AATTTACAGC CAACCATGAT CACATACGGC GCCATGCTCG CCGCGGGCGC GGCGGCGGAC
GACGTCGACG TGCGTTGGTC GGAGGACTTG TTCGCTCAAG CGTTGGAATC TGGCGCGTGT
GGCAACGCAG GGAACGATCA CATGGTGACT TCTATGCTCC AGACGTATGC TCGCGGCGTC
GCGCTCGAGC AAATCGAGCG TGATGTCGCG ATGGAACGCG GAGAGAGCGT CGTGCAAGCG
CTCATAGAGG ACGCGCAGTG GGACGAACGG CGCGCCGAGT CAACGCCCAA CGGACGCGTC
TGGTCGGCGT TGATAACGCT TTGCGCTCGA TGTGGGCGCG CCGCGCGCGC GATCGAAGTG
CTCAAGATTA TGATTTCTAC TCGCTCGCAT CGTGTGGGAC ACGAATGGTT GCACTTGACG
TACGCCTTGA CGTCCGCGCT CGAAGCGTCG AAGGAGGGCA TCGAGTACTT TGCCCGCGTG
CAGCGCGAAA TCGAACAGAG CCCGGCGATG GTTCGAGACT GCACGGGCGT TCGCAACGGC
TTAATCGCCA CACATTTGCA CTTTGGTGAT TTCAAGAGTG CGTTTAAAGT CTACGACGAC
TTCAAAAACG ATATTTTCAA GTACCGCAAG GCGCACGAAG AGAATTGGAA CGCGCGCGCG
CGGAGAGGGT TGGAACGTCA ACTTCCAGAT ACGATTACGT ACAACTCCCT CATCTACGCG
TGCGCTGATG ACGACGTCAA GGCCATGGGA CTGTATCACG ACATGGTCTC GAACGGAATC
AATCCTACAG TGCGAACGTA CGTCGCGCTC ATCGTCGCCT TGAGCCGATC AAAGCGTGGA
AGTAAAGTCA CCGAGGCGGA AAAAATATTC AAAGCCGCCA TCGACGACGG CGTGACGCCG
AACGAGTTTT TGTTCACCGC GCTCATGGAC GCTCAGGTCA AAGGCAACCG GCCGTTATCT
GCGTTTGAAA CGTACGCGCG CATGATTGAA GCTGATGTCA ACTGCACGAC TGTGACTTTC
GGGTGCGCAC TGCAAGCGTG CTGTTACGTC GAGGATGTCG AGGAGAGCGT CGAGCGCGCG
TACTCGGTGC TTCGTGATAT GACGGAGCGT GACGTCCAGA TGAACGACTG GTGCTCTAAC
ACGTTCTTGC GCGTCATATC ACGCGCCGGT CGCATTGAAG AAATGCTCGA AGAAGTGAAA
AAGACGGTTC GTCGTAAAGG CAAGCTCGAA CAAGAGACGC TTGAAGCCAT CATTCGGGCC
TTGTGTTCGG CGGGTTACGT CGAGCGCGCC AATCGCTTCA TCTCTATGAT GAACTCGCGT
AACTTGGAAC CGCGTGAGCA AACGTTCAAG GAGTTCATCG TCGCGAGTAG TCGCGATGGA
TTCGTCGATT GGGCTTGGGA GTCGTACAAA CGTTTCACAC GTTTAGGACA CAAACTCGAC
GCGGGCACGC GGTCGGCGCT AGTCACCGTC TTGAGCGTCG CTTCGACGAG CCCGGACCCC
GACGATGCGG AACTCTTGCT CGCTCGCGCG ATCGGCGTCT TCGAAGCCGC GTTTAAACGC
GCGGATGAAG ACAATGGGCC ACAAGTCTTG GACGTCATCG ACGCCGAAGC GCGATGCGCG
CTCATAGTCG CCATGGCGCG AAGCGAAAAA CTTGACCGAG CATTGGATAT CTGGCGCGAC
TCCCCAAAGG CTCAATCATT TTCCAAGGCG CGTAAGCACA CTTCGAGTGA AGGGAACGAT
TACATCGGCG ATGTGCGCGC CATGTATGAG TGCCTCATCG AAGTGTGCTG TCACGAAGAT
CGCATCGACG ACGCGCTGGA GGTGTTCGAT CACTTGAAGG ACGCCGGCGT GCGCGTCAGT
ACGGTGACGC TCGCGTTTTT GGAATCATCG TGCCGCCGAT GTCGCGTGGA GGAATGGCGA
ATGTTTGACG TGTGCGCACA AATGCGCGCG CAAGTGGAAC AAAAAAACGA AGGTCGCCTG
GCGAAGCCGA CGAAGATGAG CCACCACGTG CGCGACGACG GCAACATCGC GAGCGAACTC
GCCACGGATG GACTGGGGGG CGAACAAAAG ACGTCGGCGT GGCGCAAAAA CGTCGATTGA
TACACTACAT TTACAAGCAC CGCACGCCGC GCTGCATTTG CTACCACTAC TACTGC
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| Protein sequence | MKTTPNCAPN IRSYNGVISA ATRKKHFPGA MWAWEEIETA NLQPTMITYG AMLAAGAAAD
DVDVRWSEDL FAQALESGAC GNAGNDHMVT SMLQTYARGV ALEQIERDVA MERGESVVQA
LIEDAQWDER RAESTPNGRV WSALITLCAR CGRAARAIEV LKIMISTRSH RVGHEWLHLT
YALTSALEAS KEGIEYFARV QREIEQSPAM VRDCTGVRNG LIATHLHFGD FKSAFKVYDD
FKNDIFKYRK AHEENWNARA RRGLERQLPD TITYNSLIYA CADDDVKAMG LYHDMVSNGI
NPTVRTYVAL IVALSRSKRG SKVTEAEKIF KAAIDDGVTP NEFLFTALMD AQVKGNRPLS
AFETYARMIE ADVNCTTVTF GCALQACCYV EDVEESVERA YSVLRDMTER DVQMNDWCSN
TFLRVISRAG RIEEMLEEVK KTVRRKGKLE QETLEAIIRA LCSAGYVERA NRFISMMNSR
NLEPREQTFK EFIVASSRDG FVDWAWESYK RFTRLGHKLD AGTRSALVTV LSVASTSPDP
DDAELLLARA IGVFEAAFKR ADEDNGPQVL DVIDAEARCA LIVAMARSEK LDRALDIWRD
SPKAQSFSKA RKHTSSEGND YIGDVRAMYE CLIEVCCHED RIDDALEVFD HLKDAGVRVS
TVTLAFLESS CRRCRVEEWR MFDVCAQMRA QVEQKNEGRL AKPTKMSHHV RDDGNIASEL
ATDGLGGEQK TSAWRKNVD
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