| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_19794 |
|---|
| Symbol | RACK1A |
|---|
| ID | 5005152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009367 |
|---|
| Strand | - |
|---|
| Start bp | 246661 |
|---|
| End bp | 247986 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640420573 |
|---|
| Product | Receptor of activated protein kinase C 1A, component of 40S small ribosomal subunit |
|---|
| Protein accession | XP_001421096 |
|---|
| Protein GI | 145353601 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 77 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0137755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTC AAATGCAGCT CAGAGGCGTG CTCAAGGGGT GCGTCGCGCG AATCGATGAT
CCGAGCGCGC GTCGCGTCGC GTCGACGGCG AACGCGCGGC GAACCGATCG TTCGTGGAAT
AGGGTCTGCG CCATCGAACG AGGCGGACGT TGACGCTCGC GGCGGCGGCG CGCGGCGATG
GGACGCGCGA CGACGGCGAC GCGTTCGTGC GATGATTATT TCACGCGTCG AACGCGCGTC
GTCTCGAGCG CGTGACCGTT CACGCGAAAC GGACTCGAGC TCGACGAGCT CGATCACGAC
GTCGAACGAC GACACTAACC CACACGTTTT TTTCATTTCC GCGCAGGCAC GAAAACTGGG
TCACGTCCAT CGCGACTCCG TTGGATAACT CTGACATTCT CTTGTCGTCC TCGCGAGACA
AGACGGTGAT CCTTTGGAAC CTGACGCGCG AGGAAGAGAA CTACGGTTAC CCGCGCCGAT
CGCTTCACGG ACACTCGCAC TTCGTGCAAG ACGTCGTCAT CTCCTCGGAC GGGCAATTCG
CGCTCTCGGG GTCTTGGGAC GGCACCCTTC GATTGTGGGA CCTTAACACC GGTACCACCA
CCCGACGCTT TGTCGGACAC ACCAAGGATG TCCTTTCGGT GGCTTTCTCC GTGGACAACC
GCCAAATCGT CTCCGGCTCC CGGGATAAGA CGATCAAGTT GTGGAACACG CTCGGCGAGT
GCAAGTACAC GATTCAAGAC GCCGACGCGC ACTCCGAGTG GGTGTCGTGC GTGCGCTTCT
CCCCGGTCAC CTCCAACCCG ATCATCGTGT CTGGGGGCTG GGATAAGCTC GTCAAGGTCT
GGAACCTCAC CAACTGCAAG ATTCGCACCA ACCTTGTTGG TCACACCGGC TACATCAACG
CCGTCACCGT CTCTCCGGAC GGTTCCTTGT GCGCCTCCGG CGGCAAGGAT GGCGTCGCCA
TGCTTTGGGA TCTCGGCGAG GGCAAGCGAT TGTACTCCCT CGATGCGGGT GACATCATTT
ACGGCTTGTG CTTCTCCCCC AACCGCTACT GGTTGTGCGC GGCGACCGAG TCCTGCGTCA
AGATTTGGGA CCTCGAATCC AAGTCCATCG TCGACGAGCT CCGCCCGGAG TTCCCGCCGG
TTGGCAAGAA GTCCCAACAA CCGTACTGCA CCTCCCTCCA ATGGTCGGCG GACGGTTCCA
CCCTCTACAC GGGCTACACC GATAACGTCA TTCGCGTTTG GTCGGTCGGT TCCGTGGGCA
CCGGCATGAT GTAAGCGGCT CACGCTTACT GGCTTTCGTT CACGTTCTTA GCAAATAGCG
AGACTG
|
|---|
| Protein sequence | MATQMQLRGV LKGHENWVTS IATPLDNSDI LLSSSRDKTV ILWNLTREEE NYGYPRRSLH
GHSHFVQDVV ISSDGQFALS GSWDGTLRLW DLNTGTTTRR FVGHTKDVLS VAFSVDNRQI
VSGSRDKTIK LWNTLGECKY TIQDADAHSE WVSCVRFSPV TSNPIIVSGG WDKLVKVWNL
TNCKIRTNLV GHTGYINAVT VSPDGSLCAS GGKDGVAMLW DLGEGKRLYS LDAGDIIYGL
CFSPNRYWLC AATESCVKIW DLESKSIVDE LRPEFPPVGK KSQQPYCTSL QWSADGSTLY
TGYTDNVIRV WSVGSVGTGM M
|
|---|
| |