| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_17805 |
|---|
| Symbol | |
|---|
| ID | 5005038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009367 |
|---|
| Strand | + |
|---|
| Start bp | 190126 |
|---|
| End bp | 191916 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 640420459 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420929 |
|---|
| Protein GI | 145353243 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.000346932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00435019 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCCG GCGCCGCGCC CGGCGCGCCG GACGACGCGG GCGGTGGCTA CGACTACGCC
GCGCAGCTCG AGCGCGAGCC CGCGCGCGCG CGCGACGCGC GGGCGGCGTT TAAACACGCG
CTGCCGCTGC TCGCGCTGAC GCTCGTCGCG CTCGCCGCGC TCGCGCTCGA CGCCGCGAGC
GTCGCGCGAG ACCGCGCGCG AGGATTCTCA AAGTTCTTTT CGTCGATCGA CGACGATCGC
GACGGCGAGC TGACGCTGGG CGAACTGGCG GAGTACTTGG GGACGGCGCG ACTCGGCGTG
GCGGGCTCGG ACGCGGCGAC GACGGCGCGA CGATTGGATT CTCCGGACGA CGACGACACG
ACGGTGAGCC TACGGGAACT GCGGCGAGGC GCGGGGTTGA TGAAGAGCGT GCGCGAGACG
GCGGAGTGGG TGCGATGGGG GGTTGGGGCG CCGGAATGCG CGAACGCGTT CGCGGAGAAC
GGCGTGTCGT CGATGGATTT TCCATCGTTG TTGGCGAAGG ACGGCGAACG GTTGCGACGG
ATGGGGGTGG TGCGCGATCA CGAAAAATTG ACGAGAGCGA TGACGAGGCA GTTGTTGCAC
GTCGGGCGCG CACCTTCGTC GCCGAGAGCG GTCAAGGCGA GCGTGGAGCG CGGCGACGGG
GAGCCGCGAG TGCGCGTGAC GTGGAGAGCG CCGAAAGATC TCGGTTCGCC GCGCGCGCAC
GAATACGTCG TGCAAAGCGG AGTCGGGGTG GGTGGTAGAG TTTTAAAGTG GACTCACGTT
GCGAACGTCG ACAGTGAGAC GTTTACGGTG GATGTTGATG AGTTGAGTCG CGCGCCTGGG
GTGCGGCACA AATTTCGCGT CATTGCTTGG GGCGAGTACG GGAGGAGTAA ATCAACCAAA
GCGATGTCGA ACTGGGTGAC GATAGCCGAT GAAAGCGACG CCAAGTGGGT GGGTACGATT
GTTTCGCTCG CTTTGACGCT TCGATTCGTC ATCGCCGCGC GTGGCCTCAT CATCCGCGGC
TTGGTGCTGA TGGCGGCCTT GGTCAAGTTT ACCGTCGCTC TAGCGAAGGG AGAGAAGAAG
AGCGTGAAGG AATTCCTCGA ACCGGCGCTC CGCATGAAGG AACCGTCGAC ACCGCCGTCC
GTCGGTATAA GCATCAACAG AAAGCTCTTC ACGCCTACGA AGGTTCTCGA GAGTCAATCG
AGCATGAGCG AGAGCGACCC TTACTTTGTC GCTGTGGGAG ATGCGTGCAT GTCCATGGAA
AGCCGCAAGC AGCTAGCAAG GAAACACTTG GACGAGCGTG AGTTCGCCGC CGGTGCGGGA
GGCTCGGACG GCTTTTCACC CGTGCATCAA AGCATAGTAT CAAGGCACGC GAGAGAAGCG
ATGACGCTCG CGCCAAACGA CTCGTTAAAT GGACGACGGC GCGAGCCAGG CGTTAAAGTT
CTCGCGTGTA GCGACCCGGG GTGTCAAGTA AACTTGAAAA AAGCTCGCAC CGTGCGGCAT
TTCTGCGGTT TATGTCAGGC GTGGTTTTGC GCGGAGCACA CGCGAGTGTC ACCTCACGGA
AATCGCGGGC GATGCAAGCC CGAGTCGCGG TGCATCTGCA CCGACTGCTA CGAGATTCTC
TCGAAAGAGG AGCAGCGAGA ATTGGACGAA GATAACGCGT ATTCGATCGC GTCTCGGACG
ACAAAAAAGA AGACGTTGTC GCGCGCTGTT ACAATGATGA TGACACGTCG ACGCGGCGCG
AAGGCGTCGG AGATTAGTAA TAATCTTTTC AAAGACGCCA TGAGCGCGTG A
|
|---|
| Protein sequence | MPPGAAPGAP DDAGGGYDYA AQLEREPARA RDARAAFKHA LPLLALTLVA LAALALDAAS
VARDRARGFS KFFSSIDDDR DGELTLGELA EYLGTARLGV AGSDAATTAR RLDSPDDDDT
TVSLRELRRG AGLMKSVRET AEWVRWGVGA PECANAFAEN GVSSMDFPSL LAKDGERLRR
MGVVRDHEKL TRAMTRQLLH VGRAPSSPRA VKASVERGDG EPRVRVTWRA PKDLGSPRAH
EYVVQSGVGV GGRVLKWTHV ANVDSETFTV DVDELSRAPG VRHKFRVIAW GEYGRSKSTK
AMSNWVTIAD ESDAKWVGTI VSLALTLRFV IAARGLIIRG LVLMAALVKF TVALAKGEKK
SVKEFLEPAL RMKEPSTPPS VGISINRKLF TPTKVLESQS SMSESDPYFV AVGDACMSME
SRKQLARKHL DEREFAAGAG GSDGFSPVHQ SIVSRHAREA MTLAPNDSLN GRRREPGVKV
LACSDPGCQV NLKKARTVRH FCGLCQAWFC AEHTRVSPHG NRGRCKPESR CICTDCYEIL
SKEEQRELDE DNAYSIASRT TKKKTLSRAV TMMMTRRRGA KASEISNNLF KDAMSA
|
|---|
| |