Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_17803 |
Symbol | |
ID | 5005037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009367 |
Strand | + |
Start bp | 187058 |
End bp | 187807 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | |
GC content | 58% |
IMG OID | 640420458 |
Product | predicted protein |
Protein accession | XP_001420928 |
Protein GI | 145353240 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5235] Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.0531621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00116929 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCGAC GTAGACCGCA GGATGGATCG AGCGAAGGGA AGACGTACGC GAACGTGAGC GCGCCGCCGA CGATGAAACC GTTGACGGTT AAGATGCTGA AGCGAGCGAT CGACGCGCGA CAGACGCCGG ATGAAACGCT CGTGGTGAAT GGGGTGCCGG TTCATAACCT GACCGTCGTC GGTAAGATTG TGGGCGTCGA GAGTAAGAGC TCGTACGTTT TGTACAAGGT GGACGATTCC ACCGGGGTGT GCGACGTCAA GGTGTGGAGT GACCAAGACG GCGATCAGAC GGCCGAGCCG ATCGAGGTTG GCGCGTACGT TCGTGTGTAT GGCTCGGTGA AGACTTTGGC CAACGAACAC ATGATTGCCG CGCACACTCA GCAGGCGGTG CGTAAGATTA CCGACCACAA CGAGGTGACG TTTCACATGT TGGAAGTCGT GTACGCGAGC GGCCACGCCG AAAAGACCAA GGTCTCGGGC GGTGCCGCGC CGGCGAACGC TTACACCGTG CCGCAACAAG CGCCGAACGT CGCCGCGAAT GGTGATTTGG GCTCCGAGGA AATCGACGTT TCAATTATGG GCGTGCTGAA GCAGTTCGCC GAGGGCGAGC AAGGGATGAC CGTTGATGAA ATCGCGTCGA AGCAAAACGG CAAGTTTACT CGCGATGCCA TCAAAGCTGC GCTCGAAGAA ATGTCGAACG GTGGTGAGGT GTTCACGACT ATCGACGAAG ACCACTACGC CGCTGTGTAA
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Protein sequence | MTRRRPQDGS SEGKTYANVS APPTMKPLTV KMLKRAIDAR QTPDETLVVN GVPVHNLTVV GKIVGVESKS SYVLYKVDDS TGVCDVKVWS DQDGDQTAEP IEVGAYVRVY GSVKTLANEH MIAAHTQQAV RKITDHNEVT FHMLEVVYAS GHAEKTKVSG GAAPANAYTV PQQAPNVAAN GDLGSEEIDV SIMGVLKQFA EGEQGMTVDE IASKQNGKFT RDAIKAALEE MSNGGEVFTT IDEDHYAAV
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