Gene OSTLU_17803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17803 
Symbol 
ID5005037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009367 
Strand
Start bp187058 
End bp187807 
Gene Length750 bp 
Protein Length249 aa 
Translation table 
GC content58% 
IMG OID640420458 
Productpredicted protein 
Protein accessionXP_001420928 
Protein GI145353240 
COG category[L] Replication, recombination and repair 
COG ID[COG5235] Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0531621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00116929 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCGAC GTAGACCGCA GGATGGATCG AGCGAAGGGA AGACGTACGC GAACGTGAGC 
GCGCCGCCGA CGATGAAACC GTTGACGGTT AAGATGCTGA AGCGAGCGAT CGACGCGCGA
CAGACGCCGG ATGAAACGCT CGTGGTGAAT GGGGTGCCGG TTCATAACCT GACCGTCGTC
GGTAAGATTG TGGGCGTCGA GAGTAAGAGC TCGTACGTTT TGTACAAGGT GGACGATTCC
ACCGGGGTGT GCGACGTCAA GGTGTGGAGT GACCAAGACG GCGATCAGAC GGCCGAGCCG
ATCGAGGTTG GCGCGTACGT TCGTGTGTAT GGCTCGGTGA AGACTTTGGC CAACGAACAC
ATGATTGCCG CGCACACTCA GCAGGCGGTG CGTAAGATTA CCGACCACAA CGAGGTGACG
TTTCACATGT TGGAAGTCGT GTACGCGAGC GGCCACGCCG AAAAGACCAA GGTCTCGGGC
GGTGCCGCGC CGGCGAACGC TTACACCGTG CCGCAACAAG CGCCGAACGT CGCCGCGAAT
GGTGATTTGG GCTCCGAGGA AATCGACGTT TCAATTATGG GCGTGCTGAA GCAGTTCGCC
GAGGGCGAGC AAGGGATGAC CGTTGATGAA ATCGCGTCGA AGCAAAACGG CAAGTTTACT
CGCGATGCCA TCAAAGCTGC GCTCGAAGAA ATGTCGAACG GTGGTGAGGT GTTCACGACT
ATCGACGAAG ACCACTACGC CGCTGTGTAA
 
Protein sequence
MTRRRPQDGS SEGKTYANVS APPTMKPLTV KMLKRAIDAR QTPDETLVVN GVPVHNLTVV 
GKIVGVESKS SYVLYKVDDS TGVCDVKVWS DQDGDQTAEP IEVGAYVRVY GSVKTLANEH
MIAAHTQQAV RKITDHNEVT FHMLEVVYAS GHAEKTKVSG GAAPANAYTV PQQAPNVAAN
GDLGSEEIDV SIMGVLKQFA EGEQGMTVDE IASKQNGKFT RDAIKAALEE MSNGGEVFTT
IDEDHYAAV