Gene OSTLU_17769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17769 
Symbol 
ID5005015 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009367 
Strand
Start bp111551 
End bp112241 
Gene Length691 bp 
Protein Length171 aa 
Translation table 
GC content60% 
IMG OID640420436 
Productpredicted protein 
Protein accessionXP_001420907 
Protein GI145353194 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1358] Ribosomal protein HS6-type (S12/L30/L7a) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0000637772 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00579454 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAAGG AAAAGACCCC GAAGAAGGAC AAGAAGGAGA AGACGCCCAA AAAGGACAAG 
TCCGCGTCGC CCGGCGGCGA CAGCGAGGAC GAGGGCGACG GCGCGCTGCG TCCGACGGCG
CCGATCGCGA CGCCGCTCGC GGATTTGAAG ACGACGAAAA AGATACTCAA AGTGGTGAAA
AAGGGTGCGC GCGACGCGAC GCGCGACGCG AACGCGCGCG ACGCGAGTCG TTCGACCGTT
GTGCGCGAAC GGGGGGCGAA AGAGGGCGAA CGCGCGCGCG GAGGGGGGGA ATGGGAGAAT
TGTTGAGAAT TCGGGACGCA AAGCGACGAC TGACGAGACG ACGGGCGAAC GCGAAACAGC
GGCCAAGGCG AAGCAGGTGA GACGAGGGGT GAAAGAGGTC GTCAAGGCGT TGAAGAAGGA
AACCAAGGGT GTGTGCGTGA TCGCTGGGGA TATCTCGCCC ATCGACGTCA TCACGCACGT
GCCGATTCTG TGCGAGGAGG CGGGCGTGCC GTACGTGTAC GTGCACAGTA AGGAAGAGCT
CGGTGCGGCT GGTATGACAA AAAGACCGAC GTCGGTGATG CTCGTGATGC CGGAGGGCGT
GAAGGGGAGC GTGAAGATGA GTTCGAGCGA TAAAAAGGAA TTCGACGACA TGTACGAGAA
GATTCTCGCG AAGGTGAAAT CGATGAAGTA A
 
Protein sequence
MGKEKTPKKD KKEKTPKKDK SASPGGDSED EGDGALRPTA PIATPLADLK TTKKILKVVK 
KAAKAKQVRR GVKEVVKALK KETKGVCVIA GDISPIDVIT HVPILCEEAG VPYVYVHSKE
ELGAAGMTKR PTSVMLVMPE GVKGSVKMSS SDKKEFDDMY EKILAKVKSM K