Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_17769 |
Symbol | |
ID | 5005015 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009367 |
Strand | + |
Start bp | 111551 |
End bp | 112241 |
Gene Length | 691 bp |
Protein Length | 171 aa |
Translation table | |
GC content | 60% |
IMG OID | 640420436 |
Product | predicted protein |
Protein accession | XP_001420907 |
Protein GI | 145353194 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1358] Ribosomal protein HS6-type (S12/L30/L7a) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0000637772 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00579454 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCAAGG AAAAGACCCC GAAGAAGGAC AAGAAGGAGA AGACGCCCAA AAAGGACAAG TCCGCGTCGC CCGGCGGCGA CAGCGAGGAC GAGGGCGACG GCGCGCTGCG TCCGACGGCG CCGATCGCGA CGCCGCTCGC GGATTTGAAG ACGACGAAAA AGATACTCAA AGTGGTGAAA AAGGGTGCGC GCGACGCGAC GCGCGACGCG AACGCGCGCG ACGCGAGTCG TTCGACCGTT GTGCGCGAAC GGGGGGCGAA AGAGGGCGAA CGCGCGCGCG GAGGGGGGGA ATGGGAGAAT TGTTGAGAAT TCGGGACGCA AAGCGACGAC TGACGAGACG ACGGGCGAAC GCGAAACAGC GGCCAAGGCG AAGCAGGTGA GACGAGGGGT GAAAGAGGTC GTCAAGGCGT TGAAGAAGGA AACCAAGGGT GTGTGCGTGA TCGCTGGGGA TATCTCGCCC ATCGACGTCA TCACGCACGT GCCGATTCTG TGCGAGGAGG CGGGCGTGCC GTACGTGTAC GTGCACAGTA AGGAAGAGCT CGGTGCGGCT GGTATGACAA AAAGACCGAC GTCGGTGATG CTCGTGATGC CGGAGGGCGT GAAGGGGAGC GTGAAGATGA GTTCGAGCGA TAAAAAGGAA TTCGACGACA TGTACGAGAA GATTCTCGCG AAGGTGAAAT CGATGAAGTA A
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Protein sequence | MGKEKTPKKD KKEKTPKKDK SASPGGDSED EGDGALRPTA PIATPLADLK TTKKILKVVK KAAKAKQVRR GVKEVVKALK KETKGVCVIA GDISPIDVIT HVPILCEEAG VPYVYVHSKE ELGAAGMTKR PTSVMLVMPE GVKGSVKMSS SDKKEFDDMY EKILAKVKSM K
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