Gene OSTLU_17763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17763 
Symbol 
ID5005110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009367 
Strand
Start bp98301 
End bp99377 
Gene Length1077 bp 
Protein Length358 aa 
Translation table 
GC content59% 
IMG OID640420531 
Productpredicted protein 
Protein accessionXP_001421050 
Protein GI145353503 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0000372491 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0117429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTGC TGCCGACGGT CGGGGCGAAG ACGCTGGCGA GGAATATGAG CGGGTACGAC 
TTGAATAAAA AAGGAACGGC GCTCGGCGAG CGACGCGTGC CGGAGAGCGG GGGGTTAGCG
GCCGGATGCG CGTACGCGGT GGCGCTGACG ATGCAGCAGT TGTGCCAGAG GGGTATTCGA
TGGTGGTTCG GGCAGAGCGC GAGCGGGACG AACGCGTGGG CGCTCGAGCA GAACAGCGCG
TTGGCGTGCG TCGGATTTAT GATCTTCTTG GGCTTCGTGG ACGACGTGCT GGATTTGCCT
TGGCGAGTGA AGATTGTCAT GCCGGGATTC GCGGCGCTGC CGCTTTTGTT GTCCTACAGC
GGTGGTACGA CGGTGCTCAT ACCATCGCCC GTTCGCGCGT TGCTAGAGTT ACCGGCGGGC
GTTCGATCGA TCGACGTCGG GCCGCTGTAT CTGTGCTACA TGTGGCTTTT GGTGGTGTTT
TGCTCCAACT CGATCAACAT CCACGCCGGA TTGAACGGGC TCGAGGCGGG GCAATCGTTG
ATCATCGCCG GTGCGATTTT GTTACTCAAC GTGTTGTCGT TAGCGAACGA TCCGTCCACG
GAGCCGGTGA CCGCCGGCGC GCACTTGTTT AGCATTTTTT TGACGCTGCC ATTCTTCGCC
ACGACGCTGG CGTTGTTGCG GCACAATTGG TATCCGTCGA AAATATTCGT CGGAGACACG
TACACGTACT TCGCGGGTAT GACGCTCGGC GTCGTGGGCA CGCTCGGGCA CTTCAGCGAA
ACGTTGCTGT TGTTCTTTCT TCCACAAGTG CTCAACTTTG TGTACAGCAC GCCGCAGCTC
TTCAAGATCG TGCACTGTCC GCGTCACCGT CTGCCCATTT TCGATCCCAA GACGGGGCTT
TTGCATCCAT CGATGGCGAC AGAGACGAGA TACAACATGA ATCTCGTGAC TTTATTCTTG
CGCCTCTTCG GTCCTTGCAC CGAGCGCGTC TTGTGCGCGC GTCTGTTGGC GTTTCAGTTT
CTTTCGTGCG CGTTCGCCTT CGTCGCGCGC CACGCGCTGA CGGGCGTCTG GAAGTAG
 
Protein sequence
MRLLPTVGAK TLARNMSGYD LNKKGTALGE RRVPESGGLA AGCAYAVALT MQQLCQRGIR 
WWFGQSASGT NAWALEQNSA LACVGFMIFL GFVDDVLDLP WRVKIVMPGF AALPLLLSYS
GGTTVLIPSP VRALLELPAG VRSIDVGPLY LCYMWLLVVF CSNSINIHAG LNGLEAGQSL
IIAGAILLLN VLSLANDPST EPVTAGAHLF SIFLTLPFFA TTLALLRHNW YPSKIFVGDT
YTYFAGMTLG VVGTLGHFSE TLLLFFLPQV LNFVYSTPQL FKIVHCPRHR LPIFDPKTGL
LHPSMATETR YNMNLVTLFL RLFGPCTERV LCARLLAFQF LSCAFAFVAR HALTGVWK