Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_13210 |
Symbol | |
ID | 5004991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009367 |
Strand | - |
Start bp | 383838 |
End bp | 384530 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | |
GC content | 61% |
IMG OID | 640420412 |
Product | predicted protein |
Protein accession | XP_001421135 |
Protein GI | 145353682 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00422519 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTCGGGC ACCGCAGTCG CGCCGGGACG TTGGCGTGGA ACTCGCACAC GCTCTCGAGC GGGAGTCGCG ATCGCGCCAT CTTGAATCGC GACATTCGAT CACCGAGCGA TTACTCTAGC AAGCTTCTCG GGCATAAGAG CGAGGTGTGC GGATTGAAGT GGTCTTACGA CGACCAACAG CTCGCGAGCG GCGGCAACGA CAATCAACTC TTCGTGTGGA ATTCGCACTC GACGTCACCA ATCTTGCGAT GCAGCGAGCA CACCGCCGCG GTCAAGGCCA TCGCGTGGTC TCCACATCAA CACGGCTTAC TCGCCAGCGG CGGCGGTACC GCCGACCGAT GCATTCGGTT TTGGAACACC GTCACCAACA CGCCGTTGCA GTGCGTCGAC ACCGGTTCGC AGGTGTGCAA CTTGGTTTGG AGCAAGAACG TGAACGAGAT CGTCAGCACG CACGGCTACA GCCAAAATCA AATCGTCGTC TGGCGTTATC CGAGTATGTC CAAGCTCACC ACGCTCACGG GCCACACCCT CCGCGTGCTC TTTCTCGCCA TTTCTCCCGA CGGCCAAACC ATCGTCACCG GCGCCGGCGA CGAGACGTTG CGCTTTTGGA ACGTCTTCCC CGGCATGAAG TCCCCCGTCT CGGGCGCCGG CGACAACACC GTCAGCACGC TCGCGCGCAC GAGCATTCGG TGA
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Protein sequence | MLGHRSRAGT LAWNSHTLSS GSRDRAILNR DIRSPSDYSS KLLGHKSEVC GLKWSYDDQQ LASGGNDNQL FVWNSHSTSP ILRCSEHTAA VKAIAWSPHQ HGLLASGGGT ADRCIRFWNT VTNTPLQCVD TGSQVCNLVW SKNVNEIVST HGYSQNQIVV WRYPSMSKLT TLTGHTLRVL FLAISPDGQT IVTGAGDETL RFWNVFPGMK SPVSGAGDNT VSTLARTSIR
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