Gene OSTLU_13193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_13193 
Symbol 
ID5005157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009367 
Strand
Start bp261470 
End bp261898 
Gene Length429 bp 
Protein Length142 aa 
Translation table 
GC content55% 
IMG OID640420578 
Productpredicted protein 
Protein accessionXP_001421100 
Protein GI145353610 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00523] eukaryotic/archaeal initiation factor 1A 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0140757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA GTAACTCCAA GGGAAAGGGA GGGAAGAACC GTCGTCGCGG GAAAGGGGGC 
GGCGAAGACG AGAAGCGCGA ACTCATCTTC AAAGAGGACG GTCAAGAGTA CGCGCAAGTG
TTGCGCATGC TCGGGAACGG GCGCTTAGAG GCGCAGTGCA TCGATGGGGT GAAGCGTTTG
TGTCACATTC GCGGTAAAAT GCGGAAAAAG GTTTGGGTGA ACACCGGGGA CATCATCCTG
TTGGGCTTGC GGGACTTTCA AGACGAAAAG GCGGACGTCA TCTTGAAGTA CTTGGCCGAC
GAGGCGCGCT CGTTGAAGGC GTACGGGGAA CTCCCGGACA CTTTCCGCGT GAACGATACG
GATACGTTCG AAGAAGAGCG CGACGAGAAC GATGACTTCT TCGATTTCGA CGACATTAAT
GACATTTAA
 
Protein sequence
MPKSNSKGKG GKNRRRGKGG GEDEKRELIF KEDGQEYAQV LRMLGNGRLE AQCIDGVKRL 
CHIRGKMRKK VWVNTGDIIL LGLRDFQDEK ADVILKYLAD EARSLKAYGE LPDTFRVNDT
DTFEEERDEN DDFFDFDDIN DI